RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 IL18Q14116 193 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 DEFB135Q30KP9 77 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 KIR2DL5AQ8N109 375 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 KIR2DL5BQ8NHK3 375 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 ST8SIA2Q92186 375 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 TMEM230Q96A57 120 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 GPR146Q96CH1 333 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 RRNAD1Q96FB5 475 aaKnown RBP13.7□□□□□ -0.22
COL7A1-209ENST00000474432 MAP6D1Q9H9H5 199 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 PUS1Q9Y606 427 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL7A1-209ENST00000474432 ALMS1Q8TCU4 4167 aa13.7□□□□□ -0.22
COL7A1-209ENST00000474432 CRYM-AS1A6NIL9 109 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 DISC1C4P0D8 188 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 UBE2CO00762 179 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 SPRY2O43597 315 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
COL7A1-209ENST00000474432 RPL5P46777 297 aaKnown RBP13.69□□□□□ -0.22
COL7A1-209ENST00000474432 TFPI2P48307 235 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 HOXA1P49639 335 aaPredicted RBP13.69□□□□□ -0.22
COL7A1-209ENST00000474432 APOC4P55056 127 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 ZNF600Q6ZNG1 722 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 FAM219AQ8IW50 185 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 OR51S1Q8NGJ8 323 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 OR52E5Q8NH55 327 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 TMEM170AQ8WVE7 144 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 RBPMSQ93062 196 aaKnown RBP13.69□□□□□ -0.22
COL7A1-209ENST00000474432 RNF183Q96D59 192 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 GALNT14Q96FL9 552 aa13.69□□□□□ -0.22
COL7A1-209ENST00000474432 C14orf166Q9Y224 244 aaKnown RBP13.69□□□□□ -0.22
COL7A1-209ENST00000474432 IGKV3-7A0A075B6H7 116 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 H3BMQ9 156 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 CORTO00230 105 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 CLN5O75503 358 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 SPCS3P61009 180 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 TCF24Q7RTU0 167 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 GBGT1Q8N5D6 347 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 PDCD10Q9BUL8 212 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.68□□□□□ -0.22
COL7A1-209ENST00000474432 TMEM56-RWDD3S4R434 201 aa13.68□□□□□ -0.22
COL7A1-209ENST00000474432 A0A0J9YWU9 116 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 IGKV1-17P01599 117 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 TNFSF8P32971 234 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 SUB1P53999 127 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL7A1-209ENST00000474432 DHODHQ02127 395 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 TNFRSF9Q07011 255 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 GINS3Q9BRX5 216 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 PRR13Q9NZ81 148 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-209ENST00000474432 CACNG5Q9UF02 275 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
COL7A1-209ENST00000474432 IGHV3-66A0A0C4DH42 116 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 DFFBO76075 338 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 BMI1P35226 326 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 TMEM187Q14656 261 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 TMEM268Q5VZI3 342 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 LYG2Q86SG7 212 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 FAM24BQ8N5W8 94 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 STPG3Q8N7X2 389 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 RNASE11Q8TAA1 199 aaKnown RBP13.66□□□□□ -0.22
COL7A1-209ENST00000474432 PRRT1Q99946 306 aa13.66□□□□□ -0.22
COL7A1-209ENST00000474432 C6orf62Q9GZU0 229 aaPredicted RBP13.66□□□□□ -0.22
COL7A1-209ENST00000474432 OPRK1P41145 380 aa13.65□□□□□ -0.22
COL7A1-209ENST00000474432 SUPT4H1P63272 117 aaKnown RBP13.65□□□□□ -0.22
COL7A1-209ENST00000474432 MS4A6AQ9H2W1 248 aa13.65□□□□□ -0.22
COL7A1-209ENST00000474432 ENY2Q9NPA8 101 aa13.65□□□□□ -0.22
COL7A1-209ENST00000474432 CRYBB3P26998 211 aa13.64□□□□□ -0.23
COL7A1-209ENST00000474432 HTR2BP41595 481 aa13.64□□□□□ -0.23
COL7A1-209ENST00000474432 CMC4P56277 68 aaPredicted RBP13.64□□□□□ -0.23
COL7A1-209ENST00000474432 TIGITQ495A1 244 aa13.64□□□□□ -0.23
COL7A1-209ENST00000474432 C2orf83Q53S99 150 aa13.64□□□□□ -0.23
COL7A1-209ENST00000474432 PRSS54Q6PEW0 395 aa13.64□□□□□ -0.23
COL7A1-209ENST00000474432 RSL24D1Q9UHA3 163 aaKnown RBP13.64□□□□□ -0.23
COL7A1-209ENST00000474432 AGRNO00468 2067 aa13.63□□□□□ -0.23
COL7A1-209ENST00000474432 CD5P06127 495 aa13.63□□□□□ -0.23
COL7A1-209ENST00000474432 IGLC1P0CG04 106 aa13.63□□□□□ -0.23
COL7A1-209ENST00000474432 NMSQ5H8A3 153 aa13.63□□□□□ -0.23
COL7A1-209ENST00000474432 IL22RA2Q969J5 263 aa13.63□□□□□ -0.23
COL7A1-209ENST00000474432 CSTL1Q9H114 145 aa13.63□□□□□ -0.23
COL7A1-209ENST00000474432 HEYLQ9NQ87 328 aaPredicted RBP13.63□□□□□ -0.23
COL7A1-209ENST00000474432 U3KQE9 123 aa13.63□□□□□ -0.23
COL7A1-209ENST00000474432 TRAV2A0A0B4J234 112 aa13.62□□□□□ -0.23
COL7A1-209ENST00000474432 FABP12A6NFH5 140 aa13.62□□□□□ -0.23
COL7A1-209ENST00000474432 JTBO76095 146 aa13.62□□□□□ -0.23
COL7A1-209ENST00000474432 NXPH3O95157 252 aa13.62□□□□□ -0.23
COL7A1-209ENST00000474432 NPPCP23582 126 aa13.62□□□□□ -0.23
COL7A1-209ENST00000474432 MCFD2Q8NI22 146 aa13.62□□□□□ -0.23
COL7A1-209ENST00000474432 TRIM63Q969Q1 353 aa13.62□□□□□ -0.23
COL7A1-209ENST00000474432 ATF4P18848 351 aaPredicted RBP13.61□□□□□ -0.23
COL7A1-209ENST00000474432 DEFB131AP59861 70 aa13.61□□□□□ -0.23
COL7A1-209ENST00000474432 PAFAH1B2P68402 229 aa13.61□□□□□ -0.23
COL7A1-209ENST00000474432 KLF9Q13886 244 aaPredicted RBP13.61□□□□□ -0.23
COL7A1-209ENST00000474432 RBMS2Q15434 407 aaKnown RBP13.61□□□□□ -0.23
COL7A1-209ENST00000474432 LYZL2Q7Z4W2 148 aa13.61□□□□□ -0.23
COL7A1-209ENST00000474432 SLC24A4Q8NFF2 622 aa13.61□□□□□ -0.23
COL7A1-209ENST00000474432 RNASEH2CQ8TDP1 164 aaKnown RBP13.61□□□□□ -0.23
COL7A1-209ENST00000474432 SCP2D1Q9UJQ7 156 aa13.61□□□□□ -0.23
COL7A1-209ENST00000474432 TRAV30A0A087WSZ9 112 aa13.6□□□□□ -0.23
COL7A1-209ENST00000474432 MPTX1A8MV57 137 aa13.6□□□□□ -0.23
COL7A1-209ENST00000474432 K7EQG2 157 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms