RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TMEM50AO95807 157 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 HTR2BP41595 481 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 ZNF79Q15937 498 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 CCDC190Q86UF4 302 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 TOMM5Q8N4H5 51 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 TMEM116Q8NCL8 245 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 TRIM63Q969Q1 353 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 RHPN1-AS1Q9BWJ2 59 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 HIPK2Q9H2X6 1198 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 HEYLQ9NQ87 328 aaPredicted RBP8.36□□□□□ -1.07
CKS1B-206ENST00000474215 CACFD1Q9UGQ2 172 aa8.36□□□□□ -1.07
CKS1B-206ENST00000474215 IGHV7-4-1A0A0J9YVY3 117 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 CEBPZOSA8MTT3 80 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 CHEK1O14757 476 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 SULT1A3P0DMM9 295 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 SULT1A4P0DMN0 295 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 ANXA3P12429 323 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 LYL1P12980 280 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
CKS1B-206ENST00000474215 MLANAQ16655 118 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 TOMM20LQ6UXN7 152 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 DEDD2Q8WXF8 326 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 FNDC4Q9H6D8 234 aaPredicted RBP8.35□□□□□ -1.07
CKS1B-206ENST00000474215 EDA2RQ9HAV5 297 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 PRR13Q9NZ81 148 aa8.35□□□□□ -1.07
CKS1B-206ENST00000474215 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
CKS1B-206ENST00000474215 A0A0B4J2A0 478 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 OR4C46A6NHA9 309 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 CLN5O75503 358 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 OPRK1P41145 380 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 SRPXP78539 464 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 NMSQ5H8A3 153 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 SPANXN2Q5MJ10 180 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 CASC10Q5T4H9 136 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 ZNF600Q6ZNG1 722 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 LGI3Q8N145 548 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 OR4X1Q8NH49 305 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 RNF2Q99496 336 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 SLC25A21Q9BQT8 299 aaPredicted RBP8.34□□□□□ -1.07
CKS1B-206ENST00000474215 GINS3Q9BRX5 216 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 RETNQ9HD89 108 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 MRPL36Q9P0J6 103 aaKnown RBP8.34□□□□□ -1.07
CKS1B-206ENST00000474215 SHPKQ9UHJ6 478 aa8.34□□□□□ -1.07
CKS1B-206ENST00000474215 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
CKS1B-206ENST00000474215 IGHV3-49A0A0A0MS15 119 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 PIGBOS1A0A0B4J2F0 54 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 A0A1B0GU03 582 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 RPS10-NUDT3A0A1W2PQS6 291 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 CCR6P51684 374 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 C2orf83Q53S99 150 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 TMEM128Q5BJH2 165 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 TMED4Q7Z7H5 227 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 SLC24A4Q8NFF2 622 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 RNASEH2CQ8TDP1 164 aaKnown RBP8.33□□□□□ -1.08
CKS1B-206ENST00000474215 FAM110AQ9BQ89 295 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 GGTLC1Q9BX51 225 aa8.33□□□□□ -1.08
CKS1B-206ENST00000474215 PUS1Q9Y606 427 aaKnown RBP eCLIP8.33□□□□□ -1.08
CKS1B-206ENST00000474215 HUWE1Q7Z6Z7 4374 aaKnown RBP8.33□□□□□ -1.08
CKS1B-206ENST00000474215 IGHV3OR16-13A0A075B7E8 117 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 TRAV30A0A087WSZ9 112 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 IGHV3-74A0A0B4J1X5 117 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 SCGB2A1O75556 95 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 NXPH3O95157 252 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 CD5P06127 495 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 SLC25A4P12235 298 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 NPPCP23582 126 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 BMI1P35226 326 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 CMC4P56277 68 aaPredicted RBP8.32□□□□□ -1.08
CKS1B-206ENST00000474215 TNFRSF9Q07011 255 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 ODF3L2Q3SX64 289 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 FAM90A2PQ658T7 463 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 NOXA1Q86UR1 476 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 TMEM170AQ8WVE7 144 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 SRRQ9GZT4 340 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 VSIRQ9H7M9 311 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 HSPB7Q9UBY9 170 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 UBQLN2Q9UHD9 624 aa8.32□□□□□ -1.08
CKS1B-206ENST00000474215 IFNA10P01566 189 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 IGKV1-17P01599 117 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 APOHP02749 345 aaPredicted RBP8.31□□□□□ -1.08
CKS1B-206ENST00000474215 VAMP1P23763 118 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 NPY1RP25929 384 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 ETFRF1Q6IPR1 90 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 TCF24Q7RTU0 167 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 LILRB2Q8N423 598 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 OR1S1Q8NH92 325 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 DTD1Q8TEA8 209 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 ST8SIA2Q92186 375 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 RBKSQ9H477 322 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 U3KQ87 197 aa8.31□□□□□ -1.08
CKS1B-206ENST00000474215 IGKV3-7A0A075B6H7 116 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 DUXBA0A1W2PPF3 345 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 DFFBO76075 338 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 TFPI2P48307 235 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 INPP1P49441 399 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 RND2P52198 227 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms