RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 CCDC190Q86UF4 302 aa11.7□□□□□ -0.54
MRPL55-226ENST00000473066 LGI3Q8N145 548 aa11.7□□□□□ -0.54
MRPL55-226ENST00000473066 A0A0B4J2A0 478 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 IGHV7-4-1A0A0J9YVY3 117 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 TSPAN4O14817 238 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 ZNF79Q15937 498 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 AARDQ4LEZ3 155 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 TRIQKQ629K1 86 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 NOXA1Q86UR1 476 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 SLC24A4Q8NFF2 622 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 MUC7Q8TAX7 377 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 CITED4Q96RK1 184 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 HIPK2Q9H2X6 1198 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 PRR13Q9NZ81 148 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 SHPKQ9UHJ6 478 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
MRPL55-226ENST00000473066 TRAV14DV4A0A0A6YYC5 116 aa11.68□□□□□ -0.54
MRPL55-226ENST00000473066 NXPH3O95157 252 aa11.68□□□□□ -0.54
MRPL55-226ENST00000473066 VAMP1P23763 118 aa11.68□□□□□ -0.54
MRPL55-226ENST00000473066 CCR6P51684 374 aa11.68□□□□□ -0.54
MRPL55-226ENST00000473066 SMCO1Q147U7 214 aa11.68□□□□□ -0.54
MRPL55-226ENST00000473066 SLC25A21Q9BQT8 299 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-226ENST00000473066 RHPN1-AS1Q9BWJ2 59 aa11.68□□□□□ -0.54
MRPL55-226ENST00000473066 IGHV3-49A0A0A0MS15 119 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 DUXBA0A1W2PPF3 345 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 CLN5O75503 358 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 NPY1RP25929 384 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 BSXQ3C1V8 233 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 TMEM128Q5BJH2 165 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 PVRIGQ6DKI7 326 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 OR1S1Q8NH92 325 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 OR10C1Q96KK4 312 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 GGTLC1Q9BX51 225 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 TMEM231Q9H6L2 316 aa11.67□□□□□ -0.54
MRPL55-226ENST00000473066 PUS1Q9Y606 427 aaKnown RBP eCLIP11.67□□□□□ -0.54
MRPL55-226ENST00000473066 HUWE1Q7Z6Z7 4374 aaKnown RBP11.67□□□□□ -0.54
MRPL55-226ENST00000473066 TRAV30A0A087WSZ9 112 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 LOC102724200A0A096LPH7 203 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 CHEK1O14757 476 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 TMEM50AO95807 157 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 CD5P06127 495 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 SLC25A4P12235 298 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 SUPT4H1P63272 117 aaKnown RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 ETFRF1Q6IPR1 90 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 LINC00322Q6ZN03 302 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 LYZL2Q7Z4W2 148 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 OR4X1Q8NH49 305 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 RNASEH2CQ8TDP1 164 aaKnown RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 NARS2Q96I59 477 aaKnown RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 FNDC4Q9H6D8 234 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-226ENST00000473066 RETNQ9HD89 108 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 UBQLN2Q9UHD9 624 aa11.66□□□□□ -0.54
MRPL55-226ENST00000473066 IGHV3OR16-13A0A075B7E8 117 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 IGHV3-74A0A0B4J1X5 117 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 IFNA10P01566 189 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 LYL1P12980 280 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 PAFAH1B2P68402 229 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 TNFRSF9Q07011 255 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 RBMS2Q15434 407 aaKnown RBP11.65□□□□□ -0.54
MRPL55-226ENST00000473066 NMSQ5H8A3 153 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 CENPSQ8N2Z9 138 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 DTD1Q8TEA8 209 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 RNF2Q99496 336 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 FAM110AQ9BQ89 295 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 SRRQ9GZT4 340 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 NDUFA13Q9P0J0 144 aa11.65□□□□□ -0.54
MRPL55-226ENST00000473066 IGKV3-7A0A075B6H7 116 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 A0A1B0GU03 582 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 A0A1W2PS18 150 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 NAP1L6A6NFF2 107 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 TFPI2P48307 235 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 RND2P52198 227 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 APOC4P55056 127 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-226ENST00000473066 OR1S2Q8NGQ3 325 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 METTL26Q96S19 204 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 HSPB7Q9UBY9 170 aa11.64□□□□□ -0.55
MRPL55-226ENST00000473066 TENM3Q9P273 2699 aa11.63□□□□□ -0.55
MRPL55-226ENST00000473066 CENPXA8MT69 81 aa11.63□□□□□ -0.55
MRPL55-226ENST00000473066 NPPCP23582 126 aa11.63□□□□□ -0.55
MRPL55-226ENST00000473066 TCF24Q7RTU0 167 aa11.63□□□□□ -0.55
MRPL55-226ENST00000473066 RBKSQ9H477 322 aa11.63□□□□□ -0.55
MRPL55-226ENST00000473066 ZFAND3Q9H8U3 227 aa11.63□□□□□ -0.55
MRPL55-226ENST00000473066 MRPL36Q9P0J6 103 aaKnown RBP11.63□□□□□ -0.55
MRPL55-226ENST00000473066 U3KQ87 197 aa11.63□□□□□ -0.55
MRPL55-226ENST00000473066 DNASE2O00115 360 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-226ENST00000473066 SFT2D2O95562 160 aa11.62□□□□□ -0.55
MRPL55-226ENST00000473066 IFNA4P05014 189 aa11.62□□□□□ -0.55
MRPL55-226ENST00000473066 UBE2MP61081 183 aaKnown RBP11.62□□□□□ -0.55
MRPL55-226ENST00000473066 RPL11P62913 178 aaKnown RBP11.62□□□□□ -0.55
MRPL55-226ENST00000473066 MLANAQ16655 118 aa11.62□□□□□ -0.55
MRPL55-226ENST00000473066 ODF3L2Q3SX64 289 aa11.62□□□□□ -0.55
MRPL55-226ENST00000473066 TIGITQ495A1 244 aa11.62□□□□□ -0.55
MRPL55-226ENST00000473066 ST8SIA2Q92186 375 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms