RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, human

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-209	ENST00000472608		U3KQ87	197 aa		10.88	□□□□□ -0.67
ABCF3-209	ENST00000472608	RYR1	P21817	5038 aa		10.88	□□□□□ -0.67
ABCF3-209	ENST00000472608	SORL1	Q92673	2214 aa		10.88	□□□□□ -0.67
ABCF3-209	ENST00000472608	LGALS9	O00182	355 aa		10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	MED6	O75586	246 aa		10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	LY86	O95711	162 aa		10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	ARL3	P36405	182 aa		10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	MFAP4	P55083	255 aa		10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	ADAMTSL5	Q6ZMM2	481 aa		10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	ZNF431	Q8TF32	576 aa	Predicted RBP	10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	MISP3	Q96FF7	219 aa		10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	EDA2R	Q9HAV5	297 aa		10.87	□□□□□ -0.67
ABCF3-209	ENST00000472608	TGOLN2	O43493	480 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	ADAP1	O75689	374 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	MT-CO2	P00403	227 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	IGHV3-23	P01764	117 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	SYNJ2BP	P57105	145 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	ID3	Q02535	119 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	FAM106A	Q4KMX7	169 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	NRARP	Q7Z6K4	114 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	SLC24A4	Q8NFF2	622 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	OR9G4	Q8NGQ1	327 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	DTD1	Q8TEA8	209 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	MARVELD1	Q9BSK0	173 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	RBKS	Q9H477	322 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	PEMT	Q9UBM1	199 aa		10.86	□□□□□ -0.67
ABCF3-209	ENST00000472608	PPP5D1	E7EU14	171 aa		10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608		F8W735	103 aa	Predicted RBP	10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608	PRAF2	O60831	178 aa		10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608	OR2C1	O95371	312 aa		10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608	PLET1	Q6UQ28	207 aa		10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608	OR52B4	Q8NGK2	314 aa		10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608	CIB3	Q96Q77	187 aa	Predicted RBP	10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608	OR4C12	Q96R67	309 aa		10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608	ZMAT4	Q9H898	229 aa		10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608		S4R3C0	116 aa		10.85	□□□□□ -0.67
ABCF3-209	ENST00000472608	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	SYNGR2	O43760	224 aa		10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	NPY1R	P25929	384 aa		10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	GPR183	P32249	361 aa		10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	NPBWR1	P48145	328 aa		10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	IL34	Q6ZMJ4	242 aa		10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	OR4D5	Q8NGN0	318 aa		10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	PINX1	Q96BK5	328 aa	Known RBP	10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	SEC22C	Q9BRL7	303 aa		10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	GPN1	Q9HCN4	374 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCF3-209	ENST00000472608	IGHV3-21	A0A0B4J1V1	117 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	OR2T8	A6NH00	312 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	MPTX1	A8MV57	137 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	SNRPGP15	A8MWD9	76 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	INMT-MINDY4	F8WBC2	141 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	SAP30	O75446	220 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	NXPH3	O95157	252 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	IFNA10	P01566	189 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	CTSG	P08311	255 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	ELL	P55199	621 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608		Q56UQ5	140 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	ETFRF1	Q6IPR1	90 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	TMEM170A	Q8WVE7	144 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	TM2D3	Q9BRN9	247 aa		10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCF3-209	ENST00000472608		A8MWP6	167 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	NDUFA4	O00483	81 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	NUPL2	O15504	423 aa	Known RBP	10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	CSN3	P07498	182 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	FRMD6-AS1	P0C7T7	363 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	SLC25A4	P12235	298 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	ADM	P35318	185 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	OPRK1	P41145	380 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	NKX2-1	P43699	371 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	RPP30	P78346	268 aa	Known RBP	10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	REL	Q04864	619 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	IAH1	Q2TAA2	248 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	OR4X1	Q8NH49	305 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	OR10C1	Q96KK4	312 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	CHRDL1	Q9BU40	450 aa		10.82	□□□□□ -0.68
ABCF3-209	ENST00000472608	GNG7	O60262	68 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	JTB	O76095	146 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	TMEM50A	O95807	157 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	PTTG1	O95997	202 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	IGLV1-51	P01701	117 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	GPX4	P36969	197 aa	Predicted RBP	10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	RAB11A	P62491	216 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	UBAC2	Q8NBM4	344 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	TMEM116	Q8NCL8	245 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	CACNG8	Q8WXS5	425 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	MARC2	Q969Z3	335 aa		10.81	□□□□□ -0.68
ABCF3-209	ENST00000472608	TRAV30	A0A087WSZ9	112 aa		10.8	□□□□□ -0.68
ABCF3-209	ENST00000472608	C2orf70	A6NJV1	201 aa		10.8	□□□□□ -0.68
ABCF3-209	ENST00000472608		K7EMT4	169 aa		10.8	□□□□□ -0.68
ABCF3-209	ENST00000472608	CLN5	O75503	358 aa		10.8	□□□□□ -0.68
ABCF3-209	ENST00000472608	SCGB2A1	O75556	95 aa		10.8	□□□□□ -0.68
ABCF3-209	ENST00000472608	MLANA	Q16655	118 aa		10.8	□□□□□ -0.68
ABCF3-209	ENST00000472608	UXS1	Q8NBZ7	420 aa		10.8	□□□□□ -0.68
ABCF3-209	ENST00000472608	OR2K2	Q8NGT1	345 aa		10.8	□□□□□ -0.68
ABCF3-209	ENST00000472608	TMEM190	Q8WZ59	177 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms