RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ZNF600Q6ZNG1 722 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 APRG1Q8IVJ8 170 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 FAM219AQ8IW50 185 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 SELENOHQ8IZQ5 122 aaKnown RBP6.68□□□□□ -1.34
USF1-204ENST00000472217 ST8SIA2Q92186 375 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 PRRT1Q99946 306 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 GINS3Q9BRX5 216 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 FNDC4Q9H6D8 234 aaPredicted RBP6.68□□□□□ -1.34
USF1-204ENST00000472217 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 ENY2Q9NPA8 101 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 MRPL36Q9P0J6 103 aaKnown RBP6.68□□□□□ -1.34
USF1-204ENST00000472217 RABL2AQ9UBK7 228 aaPredicted RBP6.68□□□□□ -1.34
USF1-204ENST00000472217 RABL2BQ9UNT1 228 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 TP53TG1Q9Y2A0 90 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 PUS1Q9Y606 427 aaKnown RBP eCLIP6.68□□□□□ -1.34
USF1-204ENST00000472217 KIR2DL5BA0A0G2JN68 375 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 KIR2DL5BA0A0G2JPC4 375 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 SPRY2O43597 315 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 NOL3O60936 208 aaKnown RBP6.67□□□□□ -1.34
USF1-204ENST00000472217 APOHP02749 345 aaPredicted RBP6.67□□□□□ -1.34
USF1-204ENST00000472217 RPL35AP18077 110 aaKnown RBP6.67□□□□□ -1.34
USF1-204ENST00000472217 TNFSF8P32971 234 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 SPCS3P61009 180 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 ZNF124Q15973 351 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 MLANAQ16655 118 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 Q6ZWC4 215 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 TCF24Q7RTU0 167 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 WFDC3Q8IUB2 231 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 KIR2DL5AQ8N109 375 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 LILRB2Q8N423 598 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 GBGT1Q8N5D6 347 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 OR52E5Q8NH55 327 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 KIR2DL5BQ8NHK3 375 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 TMEM230Q96A57 120 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 GPR146Q96CH1 333 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 GALNT14Q96FL9 552 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 SOSTQ9BQB4 213 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 VSIRQ9H7M9 311 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.67□□□□□ -1.34
USF1-204ENST00000472217 PRR13Q9NZ81 148 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 CACNG5Q9UF02 275 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 RSL24D1Q9UHA3 163 aaKnown RBP6.67□□□□□ -1.34
USF1-204ENST00000472217 TMEM56-RWDD3S4R434 201 aa6.67□□□□□ -1.34
USF1-204ENST00000472217 DNAH7Q8WXX0 4024 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 IGHV3-66A0A0C4DH42 116 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 A0A0J9YWU9 116 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 UBE2CO00762 179 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 CLN5O75503 358 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 NXPH3O95157 252 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 BMI1P35226 326 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 HTR2BP41595 481 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 EWSR1Q01844 656 aaKnown RBP eCLIP6.66□□□□□ -1.34
USF1-204ENST00000472217 TMEM187Q14656 261 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 STPG3Q8N7X2 389 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 OR4X1Q8NH49 305 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 MCFD2Q8NI22 146 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 MAP6D1Q9H9H5 199 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 HEYLQ9NQ87 328 aaPredicted RBP6.66□□□□□ -1.34
USF1-204ENST00000472217 SCP2D1Q9UJQ7 156 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 CSMD3Q7Z407 3707 aa6.66□□□□□ -1.34
USF1-204ENST00000472217 FABP12A6NFH5 140 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 CEBPZOSA8MTT3 80 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 DFFBO76075 338 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 JTBO76095 146 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 IGKV1-17P01599 117 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 CD5P06127 495 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 SULT1A3P0DMM9 295 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 SULT1A4P0DMN0 295 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 CMC4P56277 68 aaPredicted RBP6.65□□□□□ -1.34
USF1-204ENST00000472217 SUPT4H1P63272 117 aaKnown RBP6.65□□□□□ -1.34
USF1-204ENST00000472217 PAFAH1B2P68402 229 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 TNFRSF9Q07011 255 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 TIGITQ495A1 244 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 C2orf83Q53S99 150 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 LYG2Q86SG7 212 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 SLC24A4Q8NFF2 622 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 TMEM170AQ8WVE7 144 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 IL22RA2Q969J5 263 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 RNF183Q96D59 192 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 MS4A6AQ9H2W1 248 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 MCUBQ9NWR8 336 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 KCNIP3Q9Y2W7 256 aa6.65□□□□□ -1.34
USF1-204ENST00000472217 RYR2Q92736 4967 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 TRAV30A0A087WSZ9 112 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 TRAV2A0A0B4J234 112 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 RPS10-NUDT3A0A1W2PQS6 291 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 SCGB2A1O75556 95 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 IGLC1P0CG04 106 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 AKR1C4P17516 323 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 NPPCP23582 126 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 CRYBB3P26998 211 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 RND2P52198 227 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 RPL11P62913 178 aaKnown RBP6.64□□□□□ -1.35
USF1-204ENST00000472217 PMS2P11Q13670 270 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 KLF9Q13886 244 aaPredicted RBP6.64□□□□□ -1.35
USF1-204ENST00000472217 NMSQ5H8A3 153 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 PRSS54Q6PEW0 395 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 LYZL2Q7Z4W2 148 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 FAM24BQ8N5W8 94 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 RNASEH2CQ8TDP1 164 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms