RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ZNF114Q8NC26 417 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 GLYATL2Q8WU03 294 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 GPR146Q96CH1 333 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 GALNT14Q96FL9 552 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 CMTM3Q96MX0 182 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 CSTL1Q9H114 145 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 VSIRQ9H7M9 311 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 FKBP11Q9NYL4 201 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 OR4C46A6NHA9 309 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 GNG7O60262 68 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 GABARAPO95166 117 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 IFNA17P01571 189 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 CD74P04233 296 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 ZNF182P17025 639 aaPredicted RBP5.89□□□□□ -1.47
USP48-207ENST00000471752 BMI1P35226 326 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 APOC4P55056 127 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 DEFB131AP59861 70 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 SCGB2B2Q4G0G5 96 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 LPCAT3Q6P1A2 487 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 SELENOHQ8IZQ5 122 aaKnown RBP5.89□□□□□ -1.47
USP48-207ENST00000471752 TERB2Q8NHR7 220 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 TSC22D3Q99576 134 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 TXN2Q99757 166 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 SCRT1Q9BWW7 348 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 FAM212BQ9NTI7 297 aaPredicted RBP5.89□□□□□ -1.47
USP48-207ENST00000471752 TP53TG1Q9Y2A0 90 aa5.89□□□□□ -1.47
USP48-207ENST00000471752 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 KIR2DL5BA0A0G2JN68 375 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 KIR2DL5BA0A0G2JPC4 375 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 RAB3DO95716 219 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 OR5AC1P0C628 307 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 RBMY1A1P0DJD3 496 aaKnown RBP5.88□□□□□ -1.47
USP48-207ENST00000471752 RBMY1CP0DJD4 496 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 UCP1P25874 307 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 ALDH3B2P48448 385 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 ERHP84090 104 aaKnown RBP5.88□□□□□ -1.47
USP48-207ENST00000471752 RBMY1FQ15415 496 aaKnown RBP5.88□□□□□ -1.47
USP48-207ENST00000471752 BSXQ3C1V8 233 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 RNASE10Q5GAN6 216 aaKnown RBP5.88□□□□□ -1.47
USP48-207ENST00000471752 PRSS54Q6PEW0 395 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 KIR2DL5AQ8N109 375 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 TMEM229BQ8NBD8 167 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 OR11H2Q8NH07 326 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 KIR2DL5BQ8NHK3 375 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 PHLDA1Q8WV24 401 aaPredicted RBP5.88□□□□□ -1.47
USP48-207ENST00000471752 BORCS5Q969J3 196 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 TMEM230Q96A57 120 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 ATP6V0BQ99437 205 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 RARRES2Q99969 163 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 CLEC5AQ9NY25 188 aa5.88□□□□□ -1.47
USP48-207ENST00000471752 MPTX1A8MV57 137 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 INS-IGF2F8WCM5 200 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 UBE2CO00762 179 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 CYB5BO43169 146 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 CLN5O75503 358 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 CDS2O95674 445 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 CA1P00915 261 aaPredicted RBP5.87□□□□□ -1.47
USP48-207ENST00000471752 C4BPBP20851 252 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 SNCAP37840 140 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 AKR1C2P52895 323 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 RPL11P62913 178 aaKnown RBP5.87□□□□□ -1.47
USP48-207ENST00000471752 RELQ04864 619 aaPredicted RBP5.87□□□□□ -1.47
USP48-207ENST00000471752 TRIM16LQ309B1 348 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 STEAP1BQ6NZ63 245 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 ZNF600Q6ZNG1 722 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 SLC35G3Q8N808 338 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 DUSP18Q8NEJ0 188 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 OR4C16Q8NGL9 310 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 TMEM222Q9H0R3 208 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 VCX3AQ9NNX9 186 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 COPZ2Q9P299 210 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 CACNG5Q9UF02 275 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 FBXL17Q9UF56 701 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 RABAC1Q9UI14 185 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 GPR132Q9UNW8 380 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 U3KQE9 123 aa5.87□□□□□ -1.47
USP48-207ENST00000471752 ABCA13Q86UQ4 5058 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 ELOA3CA0A087WX78 387 aaPredicted RBP5.86□□□□□ -1.47
USP48-207ENST00000471752 TEX13DA0A0J9YY54 714 aaPredicted RBP5.86□□□□□ -1.47
USP48-207ENST00000471752 K7EQG2 157 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 DNASE2O00115 360 aaPredicted RBP5.86□□□□□ -1.47
USP48-207ENST00000471752 ZNF688P0C7X2 276 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 CRYBB3P26998 211 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 NPBWR1P48145 328 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 HOXA1P49639 335 aaPredicted RBP5.86□□□□□ -1.47
USP48-207ENST00000471752 SUPT4H1P63272 117 aaKnown RBP5.86□□□□□ -1.47
USP48-207ENST00000471752 DHODHQ02127 395 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 TMEM187Q14656 261 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 USF2Q15853 346 aaPredicted RBP5.86□□□□□ -1.47
USP48-207ENST00000471752 AARDQ4LEZ3 155 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 MZT2AQ6P582 158 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 ZNF767PQ75MW2 155 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 LYZL2Q7Z4W2 148 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 ARRDC1Q8N5I2 433 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 STXBP6Q8NFX7 210 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 OR51S1Q8NGJ8 323 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 OR4X1Q8NH49 305 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 DCANP1Q8TF63 244 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 ZNF486Q96H40 463 aaPredicted RBP5.86□□□□□ -1.47
USP48-207ENST00000471752 NAA60Q9H7X0 242 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms