RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 DPPA3Q6W0C5 159 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 Q6ZQT0 140 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 OR6V1Q8N148 313 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 LINC00471Q8N535 108 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 SIGLECL1Q8N7X8 197 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 ZNF565Q8N9K5 539 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 CT55Q8WUE5 264 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 SERPINI1Q99574 410 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 TRIM4Q9C037 500 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 OR5AC2Q9NZP5 309 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 SLC22A13Q9Y226 551 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 ERGIC3Q9Y282 383 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 SDK1Q7Z5N4 2213 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 PIK3C2GO75747 1445 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 ZFYVE9O95405 1425 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 TRAV14DV4A0A0A6YYC5 116 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 hADV38S2A0JD32 116 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 TMEM114B3SHH9 223 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 FADS1O60427 444 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 TCL1BO95988 128 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 S100A6P06703 90 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 RNASE3P12724 160 aaKnown RBP0.71□□□□□ -2.3
COPS3-206ENST00000471414 IL9P15248 144 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 SPI1P17947 270 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 FKBP2P26885 142 aaKnown RBP0.71□□□□□ -2.3
COPS3-206ENST00000471414 HIST1H3AP68431 136 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 H3F3AP84243 136 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 CDK10Q15131 360 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 SURF2Q15527 256 aaPredicted RBP0.71□□□□□ -2.3
COPS3-206ENST00000471414 C12orf74Q32Q52 190 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 KHDC3LQ587J8 217 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 TMEM97Q5BJF2 176 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 SPANXN5Q5MJ07 72 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 KRT222Q8N1A0 295 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 HIST3H2BBQ8N257 126 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 C12orf45Q8N5I9 185 aaPredicted RBP0.71□□□□□ -2.3
COPS3-206ENST00000471414 C12orf29Q8N999 325 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 GDPD1Q8N9F7 314 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 OR4E2Q8NGC2 313 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 PRAP1Q96NZ9 151 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 SLC50A1Q9BRV3 221 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 REG4Q9BYZ8 158 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 CCDC90BQ9GZT6 254 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 MIXL1Q9H2W2 232 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 GLTPQ9NZD2 209 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 PRELID3BQ9Y3B1 194 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 COL6A6A6NMZ7 2263 aa0.71□□□□□ -2.3
COPS3-206ENST00000471414 INTS1Q8N201 2190 aaKnown RBP0.7□□□□□ -2.3
COPS3-206ENST00000471414 C19orf84I3L1E1 186 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 HCRTO43612 131 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 PDE6DO43924 150 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 ZNF682O95780 498 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 HAND1O96004 215 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 S100A4P26447 101 aaKnown RBP0.7□□□□□ -2.3
COPS3-206ENST00000471414 AP3S2P59780 193 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 FADDQ13158 208 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 RHEBQ15382 184 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.7□□□□□ -2.3
COPS3-206ENST00000471414 TRAPPC6BQ86SZ2 158 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 OR52R1Q8NGF1 315 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 OR5A1Q8NGJ0 315 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 AQP3Q92482 292 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 RNASE7Q9H1E1 156 aaKnown RBP0.7□□□□□ -2.3
COPS3-206ENST00000471414 TRABDQ9H4I3 376 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 C14orf105Q9NVL8 296 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 IDI2-AS1Q9NZ38 188 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 FBXO5Q9UKT4 447 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 CCDC144AA2RUR9 1427 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 MED12LQ86YW9 2145 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 DLG5Q8TDM6 1919 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 RTL1A6NKG5 1358 aa0.7□□□□□ -2.3
COPS3-206ENST00000471414 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 SBF1O95248 1867 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 KIF1BO60333 1816 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 SCN10AQ9Y5Y9 1956 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 hCG_1818297A0A087WSY0 165 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 A8MT66 165 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 OR2T1O43869 369 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 OR2B3O76000 313 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 SERPINE1P05121 402 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 C8GP07360 202 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 CTXN2P0C2S0 81 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 MIFP14174 115 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 PPIBP23284 216 aaKnown RBP0.69□□□□□ -2.3
COPS3-206ENST00000471414 KRTAP10-4P60372 401 aaPredicted RBP0.69□□□□□ -2.3
COPS3-206ENST00000471414 YPEL3P61236 119 aaPredicted RBP0.69□□□□□ -2.3
COPS3-206ENST00000471414 SPA17Q15506 151 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 LINC01554Q52M75 96 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 OOSP2Q86WS3 158 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 PHF13Q86YI8 300 aaPredicted RBP0.69□□□□□ -2.3
COPS3-206ENST00000471414 OR52L1Q8NGH7 329 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 OR51A2Q8NGJ7 313 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 OR4C6Q8NH72 309 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 C2orf50Q96LR7 162 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 TLNRD1Q9H1K6 362 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 OSTCQ9NRP0 149 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 UQCC1Q9NVA1 299 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 TAS2R4Q9NYW5 299 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 CYSLTR1Q9Y271 337 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 SNURFQ9Y675 71 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms