RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 LFNGQ8NES3 379 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 OR1P1Q8NH06 330 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 NANPQ8TBE9 248 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 TMEM170AQ8WVE7 144 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 C17orf50Q8WW18 174 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 SLC35E1Q96K37 410 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 Q96MF0 132 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 TMEM68Q96MH6 324 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 P2RX4Q99571 388 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 FOXC2Q99958 501 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 RSG1Q9BU20 258 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 NPCDR1Q9BY65 106 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 TMPRSS5Q9H3S3 457 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 TRAV1-1A0A0B4J248 108 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 A0A1B0GW64 132 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 NPIPB5A8MRT5 1133 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 TEX22C9J3V5 150 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 TRIAP1O43715 76 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 HLA-DRB1P01911 266 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 CRYGCP07315 174 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 IGHV4-38-2P0DP08 117 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 CD24P25063 80 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 OPRK1P41145 380 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 RPL29P47914 159 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 CX3CL1P78423 397 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 AKR1C1Q04828 323 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 KLF17Q5JT82 389 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 FAM120AOSQ5T036 256 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 RUSC1-AS1Q66K80 236 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 HIST2H2BCQ6DN03 193 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 Q6ZRG5 221 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 SLC16A13Q7RTY0 426 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 C16orf82Q7Z2V1 217 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 TTC9CQ8N5M4 171 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 FAM213BQ8TBF2 198 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 ABHD5Q8WTS1 349 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 SSMEM1Q8WWF3 244 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 MBD3L1Q8WWY6 194 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 RBM14Q96PK6 669 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 SSX3Q99909 188 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 HRH4Q9H3N8 390 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 PITPNC1Q9UKF7 332 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 MOB4Q9Y3A3 225 aa4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 LSM4Q9Y4Z0 139 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 F11RQ9Y624 299 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-204ENST00000471297 KMT2BQ9UMN6 2715 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 IGHV3OR16-10A0A075B7F0 116 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 IGHV7-81A0A0B4J1V7 117 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 A0A0U1RQK1 487 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 KRBOX1C9JBD0 128 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 M0QZK8 103 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 AGPAT2O15120 278 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 DEFA4P12838 97 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 AREGP15514 252 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 HIST1H1BP16401 226 aaKnown RBP4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 CTRB1P17538 263 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 M6PRP20645 277 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 PAX6P26367 422 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 SSBP2P81877 361 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 ZNF616Q08AN1 781 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 GAMTQ14353 236 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 PEA15Q15121 130 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 FFAR4Q5NUL3 377 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 CTRB2Q6GPI1 263 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 BRD3OSQ6XYD6 125 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 C9orf139Q6ZV77 190 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 C5orf56Q8N8D9 126 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 THAP8Q8NA92 274 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 TMEM116Q8NCL8 245 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 OR10G4Q8NGN3 311 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 OR10G9Q8NGN4 311 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 OR10G7Q8NGN6 311 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 PIFOQ8TCI5 191 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 C22orf15Q8WYQ4 148 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 ARPC1AQ92747 370 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 MGST2Q99735 147 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 SLC25A33Q9BSK2 321 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 PBDC1Q9BVG4 233 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 C19orf24Q9BVV8 132 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 ACTR3CQ9C0K3 210 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 SMDT1Q9H4I9 107 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 RPRMQ9NS64 109 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 SLC39A9Q9NUM3 307 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 THYN1Q9P016 225 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 RFNGQ9Y644 331 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 PXMP4Q9Y6I8 212 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 NBEAQ8NFP9 2946 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 CFAP46Q8IYW2 2715 aa4.8□□□□□ -1.64
SMNDC1-204ENST00000471297 ARHGAP32A7KAX9 2087 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 CTXND1A0A1B0GTU2 59 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 A0A1W2PPV4 95 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 A6NDX4 124 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 I3L521 148 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 REG1AP05451 166 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 FHITP49789 147 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 ELLP55199 621 aaPredicted RBP4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 B2MP61769 119 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 SELENOTP62341 195 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms