RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 BCL9LQ86UU0 1499 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 NAIPQ13075 1403 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 ADAMTS13Q76LX8 1427 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 IGLV1-50A0A075B6I6 118 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 IGKV1-12A0A0C4DH73 117 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 SPAARA0A1B0GVQ0 90 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 IRGMA1A4Y4 181 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 ODAMA1E959 279 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 PINLYPA6NC86 204 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 ZNF860A6NHJ4 632 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 C9JCJ5 164 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 ZNF670-ZNF695F2Z2N8 137 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 IGKV1-5P01602 117 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 IGKV1D-12P01611 117 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 ZNF728P0DKX0 622 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 FABP2P12104 132 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 HLA-EP13747 358 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 HIST1H1BP16401 226 aaKnown RBP3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 NMUP48645 174 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 UBE2AP49459 152 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 NUDT2P50583 147 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 TMBIM6P55061 237 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 FGF12P61328 243 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 SP6Q3SY56 376 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 RPL22L1Q6P5R6 122 aaKnown RBP3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 GTF2H5Q6ZYL4 71 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 MSRB3Q8IXL7 192 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 H1FOOQ8IZA3 346 aaPredicted RBP3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 C4orf33Q8N1A6 199 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 C20orf203Q8NBC4 194 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 OR5H6Q8NGV6 325 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 PP6455Q8WZ26 134 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 ELSPBP1Q96BH3 223 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 RMI2Q96E14 147 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 TRIP11Q15643 1979 aa3.05□□□□□ -1.92
PRPF40A-206ENST00000471167 ADGBQ8N7X0 1667 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 ARHGEF11O15085 1522 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 GRIN2AQ12879 1464 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 TCOF1Q13428 1488 aaKnown RBP3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 MBD5Q9P267 1494 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 ARHGAP31Q2M1Z3 1444 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 SPATA31E1Q6ZUB1 1445 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 TMEM2Q9UHN6 1383 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 MYH7P12883 1935 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 IGHV3-66A0A0C4DH42 116 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 TRBV7-6A0A0J9YX20 115 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 BBIP1A8MTZ0 92 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 H0YJW9 148 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 M0R378 163 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 CST7O76096 145 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 NCR2O95944 276 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 NAPSAO96009 420 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 LGALS3P17931 250 aaKnown RBP3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 ZNF136P52737 540 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 TAS2R45P59539 299 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 CCL20P78556 96 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 AADACL3Q5VUY0 350 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 MORN3Q6PF18 240 aaPredicted RBP3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 LINC00305Q7Z4B0 112 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 FER1L6-AS1Q8NA97 138 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 DEDD2Q8WXF8 326 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 RNASE6Q93091 150 aaKnown RBP3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 MAGOHBQ96A72 148 aaKnown RBP3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 OR4C12Q96R67 309 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 MRPL57Q9BQC6 102 aaKnown RBP3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 HDHD3Q9BSH5 251 aaPredicted RBP3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 C1QTNF6Q9BXI9 259 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 SNHG12Q9BXW3 62 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 LHX9Q9NQ69 397 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 C8orf17Q9NRJ1 99 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 RNF11Q9Y3C5 154 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 TSPOAP1O95153 1857 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 RALGAPA2Q2PPJ7 1873 aa3.04□□□□□ -1.92
PRPF40A-206ENST00000471167 ARHGAP21Q5T5U3 1957 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 IGHV3OR15-7A0A075B7D8 119 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 IGHV1-58A0A0C4DH39 117 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 A8MWL6 223 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 SOCS1O15524 211 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 PRM2P04554 102 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 ZNF688P0C7X2 276 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 S100A4P26447 101 aaKnown RBP3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 ATP6V0CP27449 155 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 CMC4P56277 68 aaPredicted RBP3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 RPL30P62888 115 aaKnown RBP3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 HES1Q14469 280 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 HSD17B12Q53GQ0 312 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 COL5A1-AS1Q5SY13 56 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 SSX8Q7RTT4 187 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 TRAPPC6BQ86SZ2 158 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 TMEM256Q8N2U0 113 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 C3orf22Q8N5N4 141 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 TEX29Q8N6K0 151 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 DAND5Q8N907 189 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 STAG3L4Q8TBR4 150 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 TBL1YQ9BQ87 522 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 BANF2Q9H503 90 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 MARCOQ9UEW3 520 aaPredicted RBP3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 FUT9Q9Y231 359 aa3.03□□□□□ -1.92
PRPF40A-206ENST00000471167 PLXND1Q9Y4D7 1925 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms