RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 OR4C16Q8NGL9 310 aa9.3□□□□□ -0.92
CCNL1-213ENST00000471044 PDCD10Q9BUL8 212 aa9.3□□□□□ -0.92
CCNL1-213ENST00000471044 C20orf24Q9BUV8 137 aa9.3□□□□□ -0.92
CCNL1-213ENST00000471044 SLIRPQ9GZT3 109 aaKnown RBP9.3□□□□□ -0.92
CCNL1-213ENST00000471044 NXF2Q9GZY0 626 aaKnown RBP9.3□□□□□ -0.92
CCNL1-213ENST00000471044 GPR132Q9UNW8 380 aa9.3□□□□□ -0.92
CCNL1-213ENST00000471044 IGHV3OR16-8A0A075B7F1 116 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 LOC102724200A0A096LPH7 203 aaPredicted RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 TEX13DA0A0J9YY54 714 aaPredicted RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 ANKRD20A5PA0PJZ0 165 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 NPIPB6E9PJ23 425 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 GSTZ1O43708 216 aaPredicted RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 GNG7O60262 68 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 NOL3O60936 208 aaKnown RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 IFNA17P01571 189 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 OR5AC1P0C628 307 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 MED14OSP0DP75 135 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 RNASE2P10153 161 aaKnown RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 SNCAP37840 140 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 DHODHQ02127 395 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 FAM219AQ8IW50 185 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 GLYATL2Q8WU03 294 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 PINX1Q96BK5 328 aaKnown RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 RRNAD1Q96FB5 475 aaKnown RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 OR10C1Q96KK4 312 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 FAM110AQ9BQ89 295 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 GGTLC1Q9BX51 225 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 KRTAP4-9Q9BYQ8 210 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 C6orf62Q9GZU0 229 aaPredicted RBP9.29□□□□□ -0.92
CCNL1-213ENST00000471044 TMEM222Q9H0R3 208 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 NAA60Q9H7X0 242 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 SMPXQ9UHP9 88 aa9.29□□□□□ -0.92
CCNL1-213ENST00000471044 IGHV7-4-1A0A0J9YVY3 117 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 CRYM-AS1A6NIL9 109 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 H3BMQ9 156 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 CORTO00230 105 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 IGHV3-48P01763 117 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 ETV6P41212 452 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 NPBWR1P48145 328 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 SUB1P53999 127 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCNL1-213ENST00000471044 AARDQ4LEZ3 155 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 ZFAND6Q6FIF0 208 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 Q6ZRM9 215 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 DUSP18Q8NEJ0 188 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 RNASE11Q8TAA1 199 aaKnown RBP9.28□□□□□ -0.92
CCNL1-213ENST00000471044 LHFPL5Q8TAF8 219 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 RBPMSQ93062 196 aaKnown RBP9.28□□□□□ -0.92
CCNL1-213ENST00000471044 PRRT1Q99946 306 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 SOSTQ9BQB4 213 aa9.28□□□□□ -0.92
CCNL1-213ENST00000471044 RSL24D1Q9UHA3 163 aaKnown RBP9.28□□□□□ -0.92
CCNL1-213ENST00000471044 TRAV14DV4A0A0A6YYC5 116 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 CHEK1O14757 476 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 TNFSF8P32971 234 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 HOXA1P49639 335 aaPredicted RBP9.27□□□□□ -0.93
CCNL1-213ENST00000471044 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 ODF3L2Q3SX64 289 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 SELENOHQ8IZQ5 122 aaKnown RBP9.27□□□□□ -0.93
CCNL1-213ENST00000471044 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 OR51S1Q8NGJ8 323 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 OR52E5Q8NH55 327 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 RHPN1-AS1Q9BWJ2 59 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 ENY2Q9NPA8 101 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 UBQLN2Q9UHD9 624 aa9.27□□□□□ -0.93
CCNL1-213ENST00000471044 FABP12A6NFH5 140 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 OR4C46A6NHA9 309 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 YIF1AO95070 293 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 TMEM50AO95807 157 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 SPCS3P61009 180 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 ZNF600Q6ZNG1 722 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 MCFD2Q8NI22 146 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 IL17DQ8TAD2 202 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 GPR146Q96CH1 333 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 RNF2Q99496 336 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.26□□□□□ -0.93
CCNL1-213ENST00000471044 SCP2D1Q9UJQ7 156 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 TMEM56-RWDD3S4R434 201 aa9.26□□□□□ -0.93
CCNL1-213ENST00000471044 TMEM187Q14656 261 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 TMEM268Q5VZI3 342 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 FAM90A2PQ658T7 463 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 TOMM20LQ6UXN7 152 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 IL22RA2Q969J5 263 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 TMEM230Q96A57 120 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 OVOL2Q9BRP0 275 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 FNDC4Q9H6D8 234 aaPredicted RBP9.25□□□□□ -0.93
CCNL1-213ENST00000471044 CSMD3Q7Z407 3707 aa9.25□□□□□ -0.93
CCNL1-213ENST00000471044 IGHV3-49A0A0A0MS15 119 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 CLN5O75503 358 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 CD5P06127 495 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 BMI1P35226 326 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 HTR2BP41595 481 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 APOC4P55056 127 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 CMC4P56277 68 aaPredicted RBP9.24□□□□□ -0.93
CCNL1-213ENST00000471044 C2orf83Q53S99 150 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 OR4X1Q8NH49 305 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 VSIRQ9H7M9 311 aa9.24□□□□□ -0.93
CCNL1-213ENST00000471044 MRPL36Q9P0J6 103 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms