RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 PAX9P55771 341 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 ZNF146Q15072 292 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 PRSS8Q16651 343 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 DEFB124Q8NES8 71 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 MRPL32Q9BYC8 188 aaKnown RBP11.86□□□□□ -0.51
HDAC7-219ENST00000470668 IFI27L2Q9H2X8 130 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 TRAV5A0A0B4J249 113 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 TMEM238LA0A1B0GVL6 79 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 A0A1W2PS18 150 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 A6NJY4 79 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 IGKV1D-33P01593 117 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 IGKV1-33P01594 117 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 TDGF1P13385 188 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 A0A0G2JMM0 328 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 A0A1W2PPB8 328 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 KIR3DP1A8MWS1 328 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 IL4P05112 153 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 CELA3AP09093 270 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 CRYGSP22914 178 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 FAM169BQ8N8A8 192 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 LYPD6BQ8NI32 183 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 TSKUQ8WUA8 353 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 MRPL16Q9NX20 251 aaKnown RBP11.86□□□□□ -0.51
HDAC7-219ENST00000470668 GAGE1Q13065 139 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 RBPMS2Q6ZRY4 209 aaKnown RBP11.86□□□□□ -0.51
HDAC7-219ENST00000470668 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 ZNF714Q96N38 554 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
HDAC7-219ENST00000470668 BEX4Q9NWD9 120 aaPredicted RBP11.86□□□□□ -0.51
HDAC7-219ENST00000470668 SH2D7A6NKC9 451 aaPredicted RBP11.85□□□□□ -0.51
HDAC7-219ENST00000470668 OR11H12B2RN74 326 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 APOMO95445 188 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 FOXG1P55316 489 aaPredicted RBP11.85□□□□□ -0.51
HDAC7-219ENST00000470668 OR11H1Q8NG94 326 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 OR11H2Q8NH07 326 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 CSRP1P21291 193 aaKnown RBP11.85□□□□□ -0.51
HDAC7-219ENST00000470668 TMEM144Q7Z5S9 345 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 A0A0G2JLM5 398 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 PRRG2O14669 202 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 PRSS2P07478 247 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 FXYD7P58549 80 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
HDAC7-219ENST00000470668 TMEM186Q96B77 213 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 GP6Q9HCN6 339 aa11.85□□□□□ -0.51
HDAC7-219ENST00000470668 SLC25A10Q9UBX3 287 aaPredicted RBP11.85□□□□□ -0.51
HDAC7-219ENST00000470668 CX3CL1P78423 397 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 MRPL52Q86TS9 123 aaKnown RBP11.84□□□□□ -0.51
HDAC7-219ENST00000470668 OR52E5Q8NH55 327 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 NABP1Q96AH0 204 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 FOXC2Q99958 501 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 ANAPC1Q9H1A4 1944 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 PMS2CLQ68D20 193 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 TIMD4Q96H15 378 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 C20orf204Q6ZNR8 217 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 LINC00479Q96M42 142 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
HDAC7-219ENST00000470668 TRAV17A0A0B4J275 112 aa11.83□□□□□ -0.51
HDAC7-219ENST00000470668 ZNF716A6NP11 495 aa11.83□□□□□ -0.51
HDAC7-219ENST00000470668 F2Z2F3 143 aa11.83□□□□□ -0.51
HDAC7-219ENST00000470668 SEC11AP67812 179 aa11.83□□□□□ -0.51
HDAC7-219ENST00000470668 RNF166Q96A37 237 aaPredicted RBP11.83□□□□□ -0.51
HDAC7-219ENST00000470668 DENND4AQ7Z401 1863 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 COX6A1P12074 109 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 ZIC4Q8N9L1 334 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 CHRNA10Q9GZZ6 450 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 HELZP42694 1942 aaKnown RBP11.83□□□□□ -0.52
HDAC7-219ENST00000470668 PLXNA3P51805 1871 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 PPIAL4EA0A075B759 164 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 NUPR1O60356 82 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 PPIAL4FP0DN26 164 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 PSG7Q13046 419 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 S4R3C0 116 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 TRBV20OR9-2A0A075B6H5 130 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 GUSBP1Q15486 140 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 SAMD5Q5TGI4 173 aa11.83□□□□□ -0.52
HDAC7-219ENST00000470668 MRPS16Q9Y3D3 137 aaKnown RBP11.83□□□□□ -0.52
HDAC7-219ENST00000470668 CLPSP04118 112 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 ZNF788Q6ZQV5 615 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 SAP25Q8TEE9 199 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 MGST2Q99735 147 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 IGKV1-6A0A0C4DH72 117 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 CELA3BP08861 270 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 NTF4P34130 210 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 ACP7Q6ZNF0 438 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 GCSAMQ8N6F7 178 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 SPAARA0A1B0GVQ0 90 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 PSG9Q00887 426 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 ZNF497Q6ZNH5 498 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 MTURNQ8N3F0 131 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 ZGRF1Q86YA3 2104 aa11.82□□□□□ -0.52
HDAC7-219ENST00000470668 SYS1-DBNDD2H3BUS1 97 aa11.81□□□□□ -0.52
HDAC7-219ENST00000470668 CCL25O15444 150 aa11.81□□□□□ -0.52
HDAC7-219ENST00000470668 IGLL1P15814 213 aa11.81□□□□□ -0.52
HDAC7-219ENST00000470668 CFHR1Q03591 330 aa11.81□□□□□ -0.52
HDAC7-219ENST00000470668 FOXF2Q12947 444 aa11.81□□□□□ -0.52
HDAC7-219ENST00000470668 ATP1A1-AS1Q5TC04 95 aa11.81□□□□□ -0.52
HDAC7-219ENST00000470668 SOX21Q9Y651 276 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-219ENST00000470668 BMI1P35226 326 aa11.81□□□□□ -0.52
HDAC7-219ENST00000470668 EMP1P54849 157 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms