RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 SPINK9Q5DT21 86 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 RPL7L1Q6DKI1 246 aaKnown RBP3.71□□□□□ -1.81
SF3B1-208ENST00000470268 PRSS54Q6PEW0 395 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 OR4D5Q8NGN0 318 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 RNASE11Q8TAA1 199 aaKnown RBP3.71□□□□□ -1.81
SF3B1-208ENST00000470268 VSTM2AQ8TAG5 236 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 FAM103A1Q9BTL3 118 aaKnown RBP3.71□□□□□ -1.81
SF3B1-208ENST00000470268 WFDC1Q9HC57 220 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM14BQ9NUH8 114 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 COA4Q9NYJ1 87 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 PITPNC1Q9UKF7 332 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 RCL1Q9Y2P8 373 aaKnown RBP3.71□□□□□ -1.81
SF3B1-208ENST00000470268 POMT1Q9Y6A1 747 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 NAV3Q8IVL0 2385 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 MTORP42345 2549 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 NSD1Q96L73 2696 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-208ENST00000470268 TEX50A0A1B0GTY4 177 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 KANTRA0A1W2PQU2 76 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 H3BP45 60 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 CLDN34H7C241 214 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 SSSCA1O60232 199 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 IFNA21P01568 189 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 HLA-DRB1P01911 266 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 APELAP0DMC3 54 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 SLC25A6P12236 298 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 LYL1P12980 280 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 PCP4P48539 62 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 FAM3BP58499 235 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-208ENST00000470268 RPL8P62917 257 aaKnown RBP3.71□□□□□ -1.82
SF3B1-208ENST00000470268 UBA52P62987 128 aaKnown RBP3.71□□□□□ -1.82
SF3B1-208ENST00000470268 OR2F1Q13607 317 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 PLGLAQ15195 96 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 TNXAQ16473 311 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 CLLU1Q5K131 121 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF562Q6V9R5 426 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 RBMS3Q6XE24 437 aaKnown RBP3.71□□□□□ -1.82
SF3B1-208ENST00000470268 C19orf35Q6ZS72 473 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF429Q86V71 674 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 MMD2Q8IY49 270 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM86BQ8N661 226 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 INO80EQ8NBZ0 244 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-208ENST00000470268 OR10W1Q8NGF6 305 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 OR4A16Q8NH70 328 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 OR4A5Q8NH83 315 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF418Q8TF45 676 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-208ENST00000470268 TMED6Q8WW62 240 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 TXN2Q99757 166 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 NDUFA4L2Q9NRX3 87 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 C1RLQ9NZP8 487 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 KIAA1456Q9P272 454 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 HSPB7Q9UBY9 170 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 FBXL17Q9UF56 701 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 LINC00527Q9UJ94 153 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 FOXA2Q9Y261 457 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-208ENST00000470268 OR51B2Q9Y5P1 312 aa3.71□□□□□ -1.82
SF3B1-208ENST00000470268 BTBD17A6NE02 478 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 FAM24AA6NFZ4 105 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 TEX22C9J3V5 150 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ATP6V0E1O15342 81 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 RBMXL2O75526 392 aaKnown RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SNAPC5O75971 98 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ATG12O94817 140 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 IGHG2P01859 326 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 AREGP15514 252 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 RPL12P30050 165 aaKnown RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 COMPP49747 757 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 HSPE1P61604 102 aaKnown RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 GNB1P62873 340 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 WT1-ASQ06250 92 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 TNFRSF9Q07011 255 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF345Q14585 488 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 FXYD3Q14802 87 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 PDLIM3Q53GG5 364 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ASPHD1Q5U4P2 390 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 C16orf82Q7Z2V1 217 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SCARB1Q8WTV0 552 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SRSF12Q8WXF0 261 aaKnown RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ASB13Q8WXK3 278 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 RASL11BQ9BPW5 248 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SAV1Q9H4B6 383 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 C11orf1Q9H5F2 150 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF702PQ9H963 129 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 PRNDQ9UKY0 176 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 A0A0D9SG52 128 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 IGLC7A0M8Q6 106 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 IGSF23A1L1A6 192 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 G3V318 75 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SOX15O60248 233 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 CST7O76096 145 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 IFNA17P01571 189 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 REG1AP05451 166 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 FGF2P09038 288 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 IAPPP10997 89 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ZP3P21754 424 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 NKX2-1P43699 371 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 VDAC2P45880 294 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 RPL27AP46776 148 aaKnown RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 FHITP49789 147 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 PAX9P55771 341 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms