RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 TMEM50AO95807 157 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 FGF2P09038 288 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 GNRHRP30968 328 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 NPBWR1P48145 328 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 FAM222AQ5U5X8 452 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 SPATA12Q7Z6I5 190 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 HOGA1Q86XE5 327 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 OR4A16Q8NH70 328 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 DCANP1Q8TF63 244 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 TMEM230Q96A57 120 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 METTL26Q96S19 204 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 NIPSNAP3BQ9BS92 247 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 C1QTNF4Q9BXJ3 329 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 FKBP11Q9NYL4 201 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 EHFQ9NZC4 300 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 DEFB1P60022 68 aa6.47□□□□□ -1.37
CCDC171-204ENST00000470191 NUTF2P61970 127 aaKnown RBP6.47□□□□□ -1.37
CCDC171-204ENST00000470191 IZUMO4Q1ZYL8 232 aa6.47□□□□□ -1.37
CCDC171-204ENST00000470191 C6orf223Q8N319 242 aa6.47□□□□□ -1.37
CCDC171-204ENST00000470191 NARS2Q96I59 477 aaKnown RBP6.47□□□□□ -1.37
CCDC171-204ENST00000470191 ZNF2Q9BSG1 426 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-204ENST00000470191 YTHDF1Q9BYJ9 559 aaKnown RBP6.47□□□□□ -1.37
CCDC171-204ENST00000470191 RHBDL2Q9NX52 303 aa6.47□□□□□ -1.37
CCDC171-204ENST00000470191 RRP15Q9Y3B9 282 aaKnown RBP6.47□□□□□ -1.37
CCDC171-204ENST00000470191 NOTOA8MTQ0 251 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 SCGNO76038 276 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 PMP2P02689 132 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 SNCAP37840 140 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 RFX2P48378 723 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 ERHP84090 104 aaKnown RBP6.46□□□□□ -1.38
CCDC171-204ENST00000470191 MLANAQ16655 118 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 TIGITQ495A1 244 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 PHLDA2Q53GA4 152 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 OGFRL1Q5TC84 451 aaPredicted RBP6.46□□□□□ -1.38
CCDC171-204ENST00000470191 ZNF367Q7RTV3 350 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 H2BFWTQ7Z2G1 175 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 OR5AP2Q8NGF4 316 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 OR5H6Q8NGV6 325 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 FAM210BQ96KR6 192 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 TSC22D3Q99576 134 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 DUSP21Q9H596 190 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 RNF167Q9H6Y7 350 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 IFT46Q9NQC8 304 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 MRPL36Q9P0J6 103 aaKnown RBP6.46□□□□□ -1.38
CCDC171-204ENST00000470191 DKK2Q9UBU2 259 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 RFNGQ9Y644 331 aa6.46□□□□□ -1.38
CCDC171-204ENST00000470191 NBDYA0A0U1RRE5 68 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 TRDV1A0A1B0GX56 115 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 TMEM189A5PLL7 270 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 H3BMM0 161 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 INAFM2P0DMQ5 153 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 CRYBB3P26998 211 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 FGF9P31371 208 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-204ENST00000470191 EIF2B2P49770 351 aaKnown RBP6.45□□□□□ -1.38
CCDC171-204ENST00000470191 DAD1P61803 113 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 PRCDQ00LT1 54 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 MXD1Q05195 221 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 GDF5OSQ5U4N7 250 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 GSG1LQ6UXU4 331 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 PRSS48Q7RTY5 328 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 BORCS5Q969J3 196 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 FXYD6Q9H0Q3 95 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 VCXQ9H320 206 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 NDUFB11Q9NX14 153 aa6.45□□□□□ -1.38
CCDC171-204ENST00000470191 HERC1Q15751 4861 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 RPS10-NUDT3A0A1W2PQS6 291 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 ZNF705FA8MVS1 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-204ENST00000470191 FAM90A26D6RGX4 464 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 NUDT3O95989 172 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 CLEC2LP0C7M8 214 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 ZNF705DP0CH99 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-204ENST00000470191 ZNF705BP0CI00 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-204ENST00000470191 OPRK1P41145 380 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 HSPE1P61604 102 aaKnown RBP6.44□□□□□ -1.38
CCDC171-204ENST00000470191 SNRPD3P62318 126 aaKnown RBP6.44□□□□□ -1.38
CCDC171-204ENST00000470191 DLK1P80370 383 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 ZNF705AQ6ZN79 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-204ENST00000470191 CMTM1Q8IZ96 169 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 SLC35G3Q8N808 338 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 OR4B1Q8NGF8 309 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 MRGPRFQ96AM1 343 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 SLC25A38Q96DW6 304 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 SEC22AQ96IW7 307 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 C7orf50Q9BRJ6 194 aaKnown RBP6.44□□□□□ -1.38
CCDC171-204ENST00000470191 AUNIPQ9H7T9 357 aa6.44□□□□□ -1.38
CCDC171-204ENST00000470191 YTHDF2Q9Y5A9 579 aaKnown RBP6.44□□□□□ -1.38
CCDC171-204ENST00000470191 SMIM9A6NGZ8 99 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 GPR31O00270 319 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 CLN5O75503 358 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 IGKV1-39P01597 117 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 IGKV1D-39P04432 117 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 HNRNPCP07910 306 aaKnown RBP eCLIP6.43□□□□□ -1.38
CCDC171-204ENST00000470191 HLA-DRB4P13762 266 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 AQP4P55087 323 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 IDNKQ5T6J7 187 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 SFXN4Q6P4A7 337 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms