RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 CASC10Q5T4H9 136 aa13.64□□□□□ -0.23
PHGDH-204ENST00000469443 RHPN1-AS1Q9BWJ2 59 aa13.64□□□□□ -0.23
PHGDH-204ENST00000469443 TRAV14DV4A0A0A6YYC5 116 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 ZNF701M0R085 212 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-204ENST00000469443 CHEK1O14757 476 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 TMEM50AO95807 157 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 AKR1C4P17516 323 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 OPRK1P41145 380 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 HTR2BP41595 481 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 ZNF79Q15937 498 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 ZNF600Q6ZNG1 722 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 TOMM5Q8N4H5 51 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 TMEM116Q8NCL8 245 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 GINS3Q9BRX5 216 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 FNDC4Q9H6D8 234 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-204ENST00000469443 HEYLQ9NQ87 328 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-204ENST00000469443 PRR13Q9NZ81 148 aa13.63□□□□□ -0.23
PHGDH-204ENST00000469443 LOC102724200A0A096LPH7 203 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-204ENST00000469443 OR4C46A6NHA9 309 aa13.62□□□□□ -0.23
PHGDH-204ENST00000469443 SULT1A3P0DMM9 295 aa13.62□□□□□ -0.23
PHGDH-204ENST00000469443 SULT1A4P0DMN0 295 aa13.62□□□□□ -0.23
PHGDH-204ENST00000469443 LYL1P12980 280 aa13.62□□□□□ -0.23
PHGDH-204ENST00000469443 SUPT4H1P63272 117 aaKnown RBP13.62□□□□□ -0.23
PHGDH-204ENST00000469443 TOMM20LQ6UXN7 152 aa13.62□□□□□ -0.23
PHGDH-204ENST00000469443 RNF2Q99496 336 aa13.62□□□□□ -0.23
PHGDH-204ENST00000469443 GGTLC1Q9BX51 225 aa13.62□□□□□ -0.23
PHGDH-204ENST00000469443 MRPL36Q9P0J6 103 aaKnown RBP13.62□□□□□ -0.23
PHGDH-204ENST00000469443 CACFD1Q9UGQ2 172 aa13.62□□□□□ -0.23
PHGDH-204ENST00000469443 IGHV3-49A0A0A0MS15 119 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 A0A0B4J2A0 478 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 CEBPZOSA8MTT3 80 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 CLN5O75503 358 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 ANXA3P12429 323 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 SRPXP78539 464 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 OR4X1Q8NH49 305 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 DEDD2Q8WXF8 326 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 FAM110AQ9BQ89 295 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 ZFAND3Q9H8U3 227 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 UBQLN2Q9UHD9 624 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 SHPKQ9UHJ6 478 aa13.61□□□□□ -0.23
PHGDH-204ENST00000469443 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
PHGDH-204ENST00000469443 MLANAQ16655 118 aa13.6□□□□□ -0.23
PHGDH-204ENST00000469443 ODF3L2Q3SX64 289 aa13.6□□□□□ -0.23
PHGDH-204ENST00000469443 C2orf83Q53S99 150 aa13.6□□□□□ -0.23
PHGDH-204ENST00000469443 NMSQ5H8A3 153 aa13.6□□□□□ -0.23
PHGDH-204ENST00000469443 LGI3Q8N145 548 aa13.6□□□□□ -0.23
PHGDH-204ENST00000469443 CSMD3Q7Z407 3707 aa13.59□□□□□ -0.23
PHGDH-204ENST00000469443 RPS10-NUDT3A0A1W2PQS6 291 aa13.59□□□□□ -0.23
PHGDH-204ENST00000469443 SCGB2A1O75556 95 aa13.59□□□□□ -0.23
PHGDH-204ENST00000469443 BMI1P35226 326 aa13.59□□□□□ -0.23
PHGDH-204ENST00000469443 CCR6P51684 374 aa13.59□□□□□ -0.23
PHGDH-204ENST00000469443 SPANXN2Q5MJ10 180 aa13.59□□□□□ -0.23
PHGDH-204ENST00000469443 LYZL2Q7Z4W2 148 aa13.59□□□□□ -0.23
PHGDH-204ENST00000469443 SLC24A4Q8NFF2 622 aa13.59□□□□□ -0.23
PHGDH-204ENST00000469443 RNASEH2CQ8TDP1 164 aaKnown RBP13.59□□□□□ -0.23
PHGDH-204ENST00000469443 IGHV3OR16-13A0A075B7E8 117 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 IGHV3-74A0A0B4J1X5 117 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 PIGBOS1A0A0B4J2F0 54 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 A0A1B0GU03 582 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 NXPH3O95157 252 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 SMCO1Q147U7 214 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 TMEM128Q5BJH2 165 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 FAM90A2PQ658T7 463 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 TMED4Q7Z7H5 227 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 SLC25A21Q9BQT8 299 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-204ENST00000469443 VSIRQ9H7M9 311 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 RYR3Q15413 4870 aa13.58□□□□□ -0.24
PHGDH-204ENST00000469443 TRAV30A0A087WSZ9 112 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 CD5P06127 495 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 SLC25A4P12235 298 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 NPY1RP25929 384 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 TNFRSF9Q07011 255 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 ZFAND6Q6FIF0 208 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 TCF24Q7RTU0 167 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 NOXA1Q86UR1 476 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 TMEM170AQ8WVE7 144 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 ST8SIA2Q92186 375 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 HSPB7Q9UBY9 170 aa13.57□□□□□ -0.24
PHGDH-204ENST00000469443 DYNC2H1Q8NCM8 4307 aaKnown RBP13.57□□□□□ -0.24
PHGDH-204ENST00000469443 IGKV3-7A0A075B6H7 116 aa13.56□□□□□ -0.24
PHGDH-204ENST00000469443 DUXBA0A1W2PPF3 345 aa13.56□□□□□ -0.24
PHGDH-204ENST00000469443 IGKV1-17P01599 117 aa13.56□□□□□ -0.24
PHGDH-204ENST00000469443 APOHP02749 345 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-204ENST00000469443 APOC4P55056 127 aa13.56□□□□□ -0.24
PHGDH-204ENST00000469443 CMC4P56277 68 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-204ENST00000469443 PRSS54Q6PEW0 395 aa13.56□□□□□ -0.24
PHGDH-204ENST00000469443 SRRQ9GZT4 340 aa13.56□□□□□ -0.24
PHGDH-204ENST00000469443 TMEM231Q9H6L2 316 aa13.56□□□□□ -0.24
PHGDH-204ENST00000469443 STARD9Q9P2P6 4700 aa13.56□□□□□ -0.24
PHGDH-204ENST00000469443 NPPCP23582 126 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 TFPI2P48307 235 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 RND2P52198 227 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 PAFAH1B2P68402 229 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 TIGITQ495A1 244 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 ETFRF1Q6IPR1 90 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 OR1S1Q8NH92 325 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 DTD1Q8TEA8 209 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 OVOL2Q9BRP0 275 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms