RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 ELK1P19419 428 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 PRSS3P35030 304 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 RPL11P62913 178 aaKnown RBP8.9□□□□□ -0.98
COL5A1-207ENST00000469093 RBMY1FQ15415 496 aaKnown RBP8.9□□□□□ -0.98
COL5A1-207ENST00000469093 LPCAT3Q6P1A2 487 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 Q8NAQ8 132 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 DIRAS2Q96HU8 199 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 HRH4Q9H3N8 390 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 PUS1Q9Y606 427 aaKnown RBP eCLIP8.9□□□□□ -0.98
COL5A1-207ENST00000469093 DNAH10Q8IVF4 4471 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 A0A1B0GU03 582 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 C11orf94C9JXX5 98 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 NPBWR1P48145 328 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 TSPAN5P62079 268 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 IZUMO4Q1ZYL8 232 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 SPINK9Q5DT21 86 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 SPANXN2Q5MJ10 180 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 ZNF600Q6ZNG1 722 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 STHQ8IWL8 128 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 MRGPRFQ96AM1 343 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 PTTG2Q9NZH5 202 aa8.89□□□□□ -0.99
COL5A1-207ENST00000469093 KIAA1109Q2LD37 5005 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 IGHV4-28A0A0C4DH34 117 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 HLA-DMBP28068 263 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 S100GP29377 79 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 UCP3P55916 312 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 IL18Q14116 193 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 PVRIGQ6DKI7 326 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
COL5A1-207ENST00000469093 SNX29P2Q8IUI4 249 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 GPX8Q8TED1 209 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 RABAC1Q9UI14 185 aa8.88□□□□□ -0.99
COL5A1-207ENST00000469093 A0A0B4J293 547 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 FABP12A6NFH5 140 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 INS-IGF2F8WCM5 200 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 K7EQG2 157 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 NPPCP23582 126 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 TNFSF8P32971 234 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 SNCAP37840 140 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 MRPS10P82664 201 aaKnown RBP8.87□□□□□ -0.99
COL5A1-207ENST00000469093 MLANAQ16655 118 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 MIXL1Q9H2W2 232 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 SCPEP1Q9HB40 452 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 MRPL36Q9P0J6 103 aaKnown RBP8.87□□□□□ -0.99
COL5A1-207ENST00000469093 X6R8D5 127 aa8.87□□□□□ -0.99
COL5A1-207ENST00000469093 ELOA3CA0A087WX78 387 aaPredicted RBP8.86□□□□□ -0.99
COL5A1-207ENST00000469093 A0A1W2PS18 150 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 KNCNA6PVL3 124 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 ZNF705EA8MWA4 302 aaPredicted RBP8.86□□□□□ -0.99
COL5A1-207ENST00000469093 IGKV1-5P01602 117 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 SPP1P10451 314 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 MIFP14174 115 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 PPP5CP53041 499 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 MORN3Q6PF18 240 aaPredicted RBP8.86□□□□□ -0.99
COL5A1-207ENST00000469093 Q6ZTC4 211 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 CSNK1G2-AS1Q8NCQ2 148 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 GRAMD2BQ96HH9 432 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 TMEM231Q9H6L2 316 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
COL5A1-207ENST00000469093 IGHV4-4A0A075B6R2 117 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 TRAV10A0A0B4J240 114 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 CLN5O75503 358 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 P0C879 139 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 RNASE2P10153 161 aaKnown RBP8.85□□□□□ -0.99
COL5A1-207ENST00000469093 C4BPBP20851 252 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 CRYBB3P26998 211 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 ETV6P41212 452 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 P2RY1P47900 373 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 SUB1P53999 127 aaKnown RBP eCLIP8.85□□□□□ -0.99
COL5A1-207ENST00000469093 PYDC2Q56P42 97 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 RNASE12Q5GAN4 147 aaKnown RBP8.85□□□□□ -0.99
COL5A1-207ENST00000469093 STXBP6Q8NFX7 210 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 DCANP1Q8TF63 244 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 METTL26Q96S19 204 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 FNDC4Q9H6D8 234 aaPredicted RBP8.85□□□□□ -0.99
COL5A1-207ENST00000469093 CLEC5AQ9NY25 188 aa8.85□□□□□ -0.99
COL5A1-207ENST00000469093 A0A1B0GVY2 172 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 CORTO00230 105 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 IFNA17P01571 189 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 ZNF688P0C7X2 276 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 PI3P19957 117 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 INPP1P49441 399 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 ACTL10Q5JWF8 245 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 LINC00299Q6ZSB3 139 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 LINC00336Q6ZUF6 198 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 SLC35G3Q8N808 338 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 OR4X1Q8NH49 305 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 S100ZQ8WXG8 99 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 RAB40CQ96S21 281 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 TP53RKQ96S44 253 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 TBC1D24Q9ULP9 559 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 PCLOQ9Y6V0 5065 aa8.84□□□□□ -0.99
COL5A1-207ENST00000469093 GABARAPH6UMI1 98 aa8.83□□□□□ -1
COL5A1-207ENST00000469093 M0QYG6 137 aa8.83□□□□□ -1
COL5A1-207ENST00000469093 IGKV1-17P01599 117 aa8.83□□□□□ -1
COL5A1-207ENST00000469093 RCVRNP35243 200 aa8.83□□□□□ -1
COL5A1-207ENST00000469093 PIGPP57054 158 aa8.83□□□□□ -1
COL5A1-207ENST00000469093 RND3P61587 244 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms