RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TIPINQ9BVW5 301 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 TLNRD1Q9H1K6 362 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.26□□□□□ -2.05
LSM5-209ENST00000468872 MMACHCQ9Y4U1 282 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 PARP14Q460N5 1801 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 TEX50A0A1B0GTY4 177 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 LOC102725191A0A1B0GVB3 256 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 CRYGDP07320 174 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 PRB4P10163 310 aaPredicted RBP2.25□□□□□ -2.05
LSM5-209ENST00000468872 ALOX5APP20292 161 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 RAP1GDS1P52306 607 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 HPCAP84074 193 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 PSG4Q00888 419 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 OR10K2Q6IF99 312 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 ALKAL1Q6UXT8 129 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 S100A7AQ86SG5 101 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 GID4Q8IVV7 300 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 CYGBQ8WWM9 190 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 C20orf166-AS1Q96NR2 134 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 OR52B2Q96RD2 323 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 VCX3BQ9H321 246 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 SLC2A9Q9NRM0 540 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 GLS2Q9UI32 602 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 DKKL1Q9UK85 242 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 POLR1DQ9Y2S0 133 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 MRPS16Q9Y3D3 137 aaKnown RBP2.25□□□□□ -2.05
LSM5-209ENST00000468872 SAMHD1Q9Y3Z3 626 aaKnown RBP2.25□□□□□ -2.05
LSM5-209ENST00000468872 FRAS1Q86XX4 4008 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 COL4A2P08572 1712 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 EML5Q05BV3 1969 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 PCDH15Q96QU1 1955 aa2.25□□□□□ -2.05
LSM5-209ENST00000468872 CLDN24A6NM45 220 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 TP53I11O14683 189 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 IL3P08700 152 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 COX6B1P14854 86 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 CCR7P32248 378 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 PPP1CCP36873 323 aaKnown RBP2.24□□□□□ -2.05
LSM5-209ENST00000468872 GNG10P50151 68 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 SERPINB9P50453 376 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 OR4D2P58180 307 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 RAB5BP61020 215 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 DAD1P61803 113 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 RPS24P62847 133 aaKnown RBP2.24□□□□□ -2.05
LSM5-209ENST00000468872 MRPS25P82663 173 aaKnown RBP2.24□□□□□ -2.05
LSM5-209ENST00000468872 IFITM2Q01629 132 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 HIST3H3Q16695 136 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 LCN8Q6JVE9 175 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 SCGB1D4Q6XE38 83 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 SDIM1Q6ZPB5 146 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 RASSF6Q6ZTQ3 369 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 NAA40Q86UY6 237 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 ZNF567Q8N184 647 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 C1orf158Q8N1D5 194 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 LRRC25Q8N386 305 aaPredicted RBP2.24□□□□□ -2.05
LSM5-209ENST00000468872 CLDN22Q8N7P3 220 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 TMBIM1Q969X1 311 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 MED18Q9BUE0 208 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 C1QTNF6Q9BXI9 259 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 CRCT1Q9UGL9 99 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 HSPE1-MOB4S4R3N1 261 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 KNL1Q8NG31 2342 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 NAV1Q8NEY1 1877 aa2.24□□□□□ -2.05
LSM5-209ENST00000468872 ZGRF1Q86YA3 2104 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 TMEM238C9JI98 176 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 J3QRE1 110 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 CHP2O43745 196 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 HBZP02008 142 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 OR4A8P0C604 315 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 OR13C7P0DN81 318 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 MYL12AP19105 171 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 OMPP47874 163 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 OR1E2P47887 323 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 LINC00313P59037 77 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 SLC35A2P78381 396 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 TMEM267Q0VDI3 215 aaPredicted RBP2.23□□□□□ -2.05
LSM5-209ENST00000468872 FOXF1Q12946 379 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 RSU1Q15404 277 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 FAM229BQ4G0N7 80 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 AKIRIN2Q53H80 203 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 ZNF550Q7Z398 422 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 WFDC11Q8NEX6 87 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 OR5C1Q8NGR4 320 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 OR51H1Q8NH63 302 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 ACY3Q96HD9 319 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 ATPIF1Q9UII2 106 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 FIS1Q9Y3D6 152 aa2.23□□□□□ -2.05
LSM5-209ENST00000468872 LAMA4Q16363 1823 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 KRT75O95678 551 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 SERPINA1P01009 418 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 IGHV3-30-3P0DP02 117 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 CDK2P24941 298 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 G0S2P27469 103 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 SLCO1A2P46721 670 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 SULT1A1P50225 295 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 AKR1C2P52895 323 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 EMX1Q04741 257 aaPredicted RBP2.22□□□□□ -2.05
LSM5-209ENST00000468872 MRPL51Q4U2R6 128 aaKnown RBP2.22□□□□□ -2.05
LSM5-209ENST00000468872 OR6V1Q8N148 313 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 SGMS2Q8NHU3 365 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 GPR119Q8TDV5 335 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms