RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 CCDC140Q96MF4 163 aa8.71□□□□□ -1.02
MSH5-214ENST00000468602 NEURL2Q9BR09 285 aa8.71□□□□□ -1.02
MSH5-214ENST00000468602 RANGRFQ9HD47 186 aaPredicted RBP8.71□□□□□ -1.02
MSH5-214ENST00000468602 C21orf62Q9NYP8 219 aa8.71□□□□□ -1.02
MSH5-214ENST00000468602 MBD2Q9UBB5 411 aa8.71□□□□□ -1.02
MSH5-214ENST00000468602 TNFSF18Q9UNG2 199 aa8.71□□□□□ -1.02
MSH5-214ENST00000468602 hCG_2014768A0A024R1R8 64 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 TRAV30A0A087WSZ9 112 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 CLN5O75503 358 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 CCNKO75909 580 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 IFNA4P05014 189 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 NPBWR1P48145 328 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 MFAP4P55083 255 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 HBG1P69891 147 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 HBG2P69892 147 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 ZNF345Q14585 488 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 C12orf54Q6X4T0 127 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 HAPLN4Q86UW8 402 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 THAP8Q8NA92 274 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 OR10P1Q8NGE3 313 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 MS4A10Q96PG2 267 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 CITED2Q99967 270 aaPredicted RBP8.7□□□□□ -1.02
MSH5-214ENST00000468602 PARD6GQ9BYG4 376 aaPredicted RBP8.7□□□□□ -1.02
MSH5-214ENST00000468602 ZNF355PQ9NSJ1 428 aa8.7□□□□□ -1.02
MSH5-214ENST00000468602 IGSF23A1L1A6 192 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 MFSD2BA6NFX1 497 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 FAM24AA6NFZ4 105 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 HAX1O00165 279 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 C1QBP02746 253 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 HSPB1P04792 205 aaKnown RBP8.69□□□□□ -1.02
MSH5-214ENST00000468602 CTSGP08311 255 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 RPL12P30050 165 aaKnown RBP8.69□□□□□ -1.02
MSH5-214ENST00000468602 OPRK1P41145 380 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 CAV2P51636 162 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 ARL16Q0P5N6 197 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 GAMTQ14353 236 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 SLC16A13Q7RTY0 426 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 TMEM144Q7Z5S9 345 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 AKAP14Q86UN6 197 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 STX12Q86Y82 276 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 GNB4Q9HAV0 340 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 PEF1Q9UBV8 284 aaKnown RBP8.69□□□□□ -1.02
MSH5-214ENST00000468602 LSM4Q9Y4Z0 139 aaKnown RBP8.69□□□□□ -1.02
MSH5-214ENST00000468602 HSPB11Q9Y547 144 aa8.69□□□□□ -1.02
MSH5-214ENST00000468602 RNF222A6NCQ9 220 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 H3BP45 60 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 METTL15P1P0C7V9 234 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 IGLC1P0CG04 106 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 MYCNOSP40205 109 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 YPEL3P61236 119 aaPredicted RBP8.68□□□□□ -1.02
MSH5-214ENST00000468602 EWSR1Q01844 656 aaKnown RBP eCLIP8.68□□□□□ -1.02
MSH5-214ENST00000468602 OR2F1Q13607 317 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 LRRC37A5PQ49AS3 106 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 LCNL1Q6ZST4 164 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 ACOT7LQ6ZUV0 252 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 GPHB5Q86YW7 130 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 DCUN1D4Q92564 292 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 MISP3Q96FF7 219 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 ZNF414Q96IQ9 312 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 TRGV9Q99603 122 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 NPVFQ9HCQ7 196 aa8.68□□□□□ -1.02
MSH5-214ENST00000468602 NOTCH1P46531 2555 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 LGALS9O00182 355 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 TGOLN2O43493 480 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 MPDU1O75352 247 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 SCGB2A1O75556 95 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 CFDP00746 253 aaPredicted RBP8.67□□□□□ -1.02
MSH5-214ENST00000468602 IGKV1-17P01599 117 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 CLEC3BP05452 202 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 ZP3P21754 424 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 ADMP35318 185 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 ZNF546Q86UE3 836 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 C3orf56Q8N813 242 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 OR4F17Q8NGA8 305 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 OR11H4Q8NGC9 324 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 OR1S2Q8NGQ3 325 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 PKD1L1Q8TDX9 2849 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 SLC35E1Q96K37 410 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 HYLS1Q96M11 299 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 OR4F4Q96R69 305 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 TMEM147Q9BVK8 224 aa8.67□□□□□ -1.02
MSH5-214ENST00000468602 MRPL36Q9P0J6 103 aaKnown RBP8.67□□□□□ -1.02
MSH5-214ENST00000468602 IGKV1D-37A0A075B6S9 117 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 LINC01619G3V211 115 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 BMPR1BO00238 502 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 TAAR5O14804 337 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 GGCTO75223 188 aaKnown RBP8.66□□□□□ -1.02
MSH5-214ENST00000468602 DFFBO76075 338 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 ELLP55199 621 aaPredicted RBP8.66□□□□□ -1.02
MSH5-214ENST00000468602 NHLH2Q02577 135 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 SLC38A11Q08AI6 406 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 ZNF616Q08AN1 781 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 KLF5Q13887 457 aaPredicted RBP8.66□□□□□ -1.02
MSH5-214ENST00000468602 MLANAQ16655 118 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 TREML4Q6UXN2 200 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 REC114Q7Z4M0 266 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 INO80EQ8NBZ0 244 aaPredicted RBP8.66□□□□□ -1.02
MSH5-214ENST00000468602 KLHL30-AS1Q8NEE0 82 aa8.66□□□□□ -1.02
MSH5-214ENST00000468602 WFDC9Q8NEX5 89 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms