RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 METTL26Q96S19 204 aa13.25□□□□□ -0.29
LINC00888-201ENST00000468380 VCXQ9H320 206 aa13.25□□□□□ -0.29
LINC00888-201ENST00000468380 SCRT2Q9NQ03 307 aa13.25□□□□□ -0.29
LINC00888-201ENST00000468380 EHFQ9NZC4 300 aa13.25□□□□□ -0.29
LINC00888-201ENST00000468380 H3BMM0 161 aa13.24□□□□□ -0.29
LINC00888-201ENST00000468380 FGF9P31371 208 aaPredicted RBP13.24□□□□□ -0.29
LINC00888-201ENST00000468380 ERHP84090 104 aaKnown RBP13.24□□□□□ -0.29
LINC00888-201ENST00000468380 DHRS2Q13268 280 aa13.24□□□□□ -0.29
LINC00888-201ENST00000468380 OR4A16Q8NH70 328 aa13.24□□□□□ -0.29
LINC00888-201ENST00000468380 NEU1Q99519 415 aa13.24□□□□□ -0.29
LINC00888-201ENST00000468380 U3KQE9 123 aa13.24□□□□□ -0.29
LINC00888-201ENST00000468380 HELTA6NFD8 242 aa13.23□□□□□ -0.29
LINC00888-201ENST00000468380 ZNF705FA8MVS1 300 aaPredicted RBP13.23□□□□□ -0.29
LINC00888-201ENST00000468380 CLEC2LP0C7M8 214 aa13.23□□□□□ -0.29
LINC00888-201ENST00000468380 ZNF705DP0CH99 300 aaPredicted RBP13.23□□□□□ -0.29
LINC00888-201ENST00000468380 ZNF705BP0CI00 300 aaPredicted RBP13.23□□□□□ -0.29
LINC00888-201ENST00000468380 IZUMO4Q1ZYL8 232 aa13.23□□□□□ -0.29
LINC00888-201ENST00000468380 C1QTNF4Q9BXJ3 329 aa13.23□□□□□ -0.29
LINC00888-201ENST00000468380 FXYD6Q9H0Q3 95 aa13.23□□□□□ -0.29
LINC00888-201ENST00000468380 DKK2Q9UBU2 259 aa13.23□□□□□ -0.29
LINC00888-201ENST00000468380 GPR31O00270 319 aa13.22□□□□□ -0.29
LINC00888-201ENST00000468380 PMP2P02689 132 aa13.22□□□□□ -0.29
LINC00888-201ENST00000468380 PHLDA2Q53GA4 152 aa13.22□□□□□ -0.29
LINC00888-201ENST00000468380 H2BFWTQ7Z2G1 175 aa13.22□□□□□ -0.29
LINC00888-201ENST00000468380 CMTM1Q8IZ96 169 aa13.22□□□□□ -0.29
LINC00888-201ENST00000468380 NRG4Q8WWG1 115 aa13.22□□□□□ -0.29
LINC00888-201ENST00000468380 FNDC4Q9H6D8 234 aaPredicted RBP13.22□□□□□ -0.29
LINC00888-201ENST00000468380 EBAG9O00559 213 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 CLN5O75503 358 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 IGKV1-17P01599 117 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 HTN3P15516 51 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 SDC2P34741 201 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 CBX5P45973 191 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 NUTF2P61970 127 aaKnown RBP13.21□□□□□ -0.29
LINC00888-201ENST00000468380 FAM222AQ5U5X8 452 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 C16orf54Q6UWD8 224 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 GLMPQ8WWB7 406 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 TMEM230Q96A57 120 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 NIPSNAP3BQ9BS92 247 aa13.21□□□□□ -0.29
LINC00888-201ENST00000468380 A0A0A6YYH2 397 aa13.2□□□□□ -0.3
LINC00888-201ENST00000468380 A6NJ64 397 aa13.2□□□□□ -0.3
LINC00888-201ENST00000468380 FXYD7P58549 80 aa13.2□□□□□ -0.3
LINC00888-201ENST00000468380 TIGITQ495A1 244 aa13.2□□□□□ -0.3
LINC00888-201ENST00000468380 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
LINC00888-201ENST00000468380 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 TMEM189A5PLL7 270 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 SMIM9A6NGZ8 99 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 FAM90A26D6RGX4 464 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 RNASE2P10153 161 aaKnown RBP13.19□□□□□ -0.3
LINC00888-201ENST00000468380 SNCAP37840 140 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 DEFB1P60022 68 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 MXD1Q05195 221 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 KCTD21Q4G0X4 260 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 IDNKQ5T6J7 187 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 OR4X1Q8NH49 305 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 MRGPRFQ96AM1 343 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 RNF167Q9H6Y7 350 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 IFT46Q9NQC8 304 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 DIABLOQ9NR28 239 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
LINC00888-201ENST00000468380 ANAPC10Q9UM13 185 aa13.19□□□□□ -0.3
LINC00888-201ENST00000468380 INS-IGF2F8WCM5 200 aa13.18□□□□□ -0.3
LINC00888-201ENST00000468380 SCAND1P57086 179 aa13.18□□□□□ -0.3
LINC00888-201ENST00000468380 GDF5OSQ5U4N7 250 aa13.18□□□□□ -0.3
LINC00888-201ENST00000468380 TBC1D26Q86UD7 250 aa13.18□□□□□ -0.3
LINC00888-201ENST00000468380 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
LINC00888-201ENST00000468380 HLA-DRB4P13762 266 aa13.17□□□□□ -0.3
LINC00888-201ENST00000468380 NAT1P18440 290 aa13.17□□□□□ -0.3
LINC00888-201ENST00000468380 OXA1LQ15070 435 aa13.17□□□□□ -0.3
LINC00888-201ENST00000468380 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
LINC00888-201ENST00000468380 C6orf223Q8N319 242 aa13.17□□□□□ -0.3
LINC00888-201ENST00000468380 OR6F1Q8NGZ6 308 aa13.17□□□□□ -0.3
LINC00888-201ENST00000468380 NARS2Q96I59 477 aaKnown RBP13.17□□□□□ -0.3
LINC00888-201ENST00000468380 RFNGQ9Y644 331 aa13.17□□□□□ -0.3
LINC00888-201ENST00000468380 HLA-DRB4X5D2U9 266 aa13.17□□□□□ -0.3
LINC00888-201ENST00000468380 A0A0B4J293 547 aa13.16□□□□□ -0.3
LINC00888-201ENST00000468380 NBDYA0A0U1RRE5 68 aa13.16□□□□□ -0.3
LINC00888-201ENST00000468380 IGKV3-20P01619 116 aa13.16□□□□□ -0.3
LINC00888-201ENST00000468380 AP2S1P53680 142 aaPredicted RBP13.16□□□□□ -0.3
LINC00888-201ENST00000468380 SNRPD3P62318 126 aaKnown RBP13.16□□□□□ -0.3
LINC00888-201ENST00000468380 OR5H2Q8NGV7 314 aa13.16□□□□□ -0.3
LINC00888-201ENST00000468380 DMBT1Q9UGM3 2413 aaPredicted RBP13.15□□□□□ -0.3
LINC00888-201ENST00000468380 HNRNPCP07910 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00888-201ENST00000468380 ETV6P41212 452 aa13.15□□□□□ -0.3
LINC00888-201ENST00000468380 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.3
LINC00888-201ENST00000468380 FAM3BP58499 235 aaPredicted RBP13.15□□□□□ -0.3
LINC00888-201ENST00000468380 ZNRF2Q8NHG8 242 aa13.15□□□□□ -0.3
LINC00888-201ENST00000468380 SEPSECSQ9HD40 501 aaKnown RBP13.15□□□□□ -0.3
LINC00888-201ENST00000468380 SSR3Q9UNL2 185 aa13.15□□□□□ -0.3
LINC00888-201ENST00000468380 TMED3Q9Y3Q3 217 aa13.15□□□□□ -0.3
LINC00888-201ENST00000468380 IGKV1-5P01602 117 aa13.14□□□□□ -0.31
LINC00888-201ENST00000468380 P0C879 139 aa13.14□□□□□ -0.31
LINC00888-201ENST00000468380 OPRK1P41145 380 aa13.14□□□□□ -0.31
LINC00888-201ENST00000468380 RPL5P46777 297 aaKnown RBP13.14□□□□□ -0.31
LINC00888-201ENST00000468380 SPATA12Q7Z6I5 190 aa13.14□□□□□ -0.31
LINC00888-201ENST00000468380 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
LINC00888-201ENST00000468380 ZNF709Q8N972 641 aa13.14□□□□□ -0.31
LINC00888-201ENST00000468380 NRN1Q9NPD7 142 aa13.14□□□□□ -0.31
LINC00888-201ENST00000468380 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
LINC00888-201ENST00000468380 CORTO00230 105 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms