RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TRIM63Q969Q1 353 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 EDA2RQ9HAV5 297 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 CACNG5Q9UF02 275 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 V9GYH0 126 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
SSBP1-207ENST00000468267 ZNF701M0R085 212 aaPredicted RBP12.76□□□□□ -0.37
SSBP1-207ENST00000468267 S100A5P33763 92 aa12.76□□□□□ -0.37
SSBP1-207ENST00000468267 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
SSBP1-207ENST00000468267 STARD9Q9P2P6 4700 aa12.76□□□□□ -0.37
SSBP1-207ENST00000468267 TRAV14DV4A0A0A6YYC5 116 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 CHEK1O14757 476 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 TMEM50AO95807 157 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 LYL1P12980 280 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 AKR1C4P17516 323 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 FAUP35544 74 aaKnown RBP12.75□□□□□ -0.37
SSBP1-207ENST00000468267 AP3S2P59780 193 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 SUPT4H1P63272 117 aaKnown RBP12.75□□□□□ -0.37
SSBP1-207ENST00000468267 ZNF79Q15937 498 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 CASC10Q5T4H9 136 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 CCDC190Q86UF4 302 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 RHPN1-AS1Q9BWJ2 59 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 FNDC4Q9H6D8 234 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-207ENST00000468267 RETNQ9HD89 108 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 HEYLQ9NQ87 328 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-207ENST00000468267 PRR13Q9NZ81 148 aa12.75□□□□□ -0.37
SSBP1-207ENST00000468267 HTR2BP41595 481 aa12.74□□□□□ -0.37
SSBP1-207ENST00000468267 MLANAQ16655 118 aa12.74□□□□□ -0.37
SSBP1-207ENST00000468267 TOMM20LQ6UXN7 152 aa12.74□□□□□ -0.37
SSBP1-207ENST00000468267 TOMM5Q8N4H5 51 aa12.74□□□□□ -0.37
SSBP1-207ENST00000468267 RNF2Q99496 336 aa12.74□□□□□ -0.37
SSBP1-207ENST00000468267 CACFD1Q9UGQ2 172 aa12.74□□□□□ -0.37
SSBP1-207ENST00000468267 LYSTQ99698 3801 aa12.74□□□□□ -0.37
SSBP1-207ENST00000468267 SULT1A3P0DMM9 295 aa12.73□□□□□ -0.37
SSBP1-207ENST00000468267 SULT1A4P0DMN0 295 aa12.73□□□□□ -0.37
SSBP1-207ENST00000468267 OPRK1P41145 380 aa12.73□□□□□ -0.37
SSBP1-207ENST00000468267 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
SSBP1-207ENST00000468267 OR4X1Q8NH49 305 aa12.73□□□□□ -0.37
SSBP1-207ENST00000468267 DEDD2Q8WXF8 326 aa12.73□□□□□ -0.37
SSBP1-207ENST00000468267 GINS3Q9BRX5 216 aa12.73□□□□□ -0.37
SSBP1-207ENST00000468267 GGTLC1Q9BX51 225 aa12.73□□□□□ -0.37
SSBP1-207ENST00000468267 MRPL36Q9P0J6 103 aaKnown RBP12.73□□□□□ -0.37
SSBP1-207ENST00000468267 LOC102724200A0A096LPH7 203 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-207ENST00000468267 IGHV3-49A0A0A0MS15 119 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 A0A0B4J2A0 478 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 CEBPZOSA8MTT3 80 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 CLN5O75503 358 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 ANXA3P12429 323 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 C2orf83Q53S99 150 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 NMSQ5H8A3 153 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 LYZL2Q7Z4W2 148 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 FAM110AQ9BQ89 295 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 UBQLN2Q9UHD9 624 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 SHPKQ9UHJ6 478 aa12.72□□□□□ -0.37
SSBP1-207ENST00000468267 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
SSBP1-207ENST00000468267 A0A1B0GU03 582 aa12.71□□□□□ -0.37
SSBP1-207ENST00000468267 CCR6P51684 374 aa12.71□□□□□ -0.37
SSBP1-207ENST00000468267 SRPXP78539 464 aa12.71□□□□□ -0.37
SSBP1-207ENST00000468267 ODF3L2Q3SX64 289 aa12.71□□□□□ -0.37
SSBP1-207ENST00000468267 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
SSBP1-207ENST00000468267 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
SSBP1-207ENST00000468267 LGI3Q8N145 548 aa12.71□□□□□ -0.37
SSBP1-207ENST00000468267 SACSQ9NZJ4 4579 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 RPS10-NUDT3A0A1W2PQS6 291 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 TNFRSF9Q07011 255 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 SMCO1Q147U7 214 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 TMEM128Q5BJH2 165 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 TMED4Q7Z7H5 227 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 SLC24A4Q8NFF2 622 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 RNASEH2CQ8TDP1 164 aaKnown RBP12.7□□□□□ -0.38
SSBP1-207ENST00000468267 TMEM170AQ8WVE7 144 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 SLC25A21Q9BQT8 299 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-207ENST00000468267 VSIRQ9H7M9 311 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 HSPB7Q9UBY9 170 aa12.7□□□□□ -0.38
SSBP1-207ENST00000468267 TRAV30A0A087WSZ9 112 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 PIGBOS1A0A0B4J2F0 54 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 LCE2BO14633 110 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 NXPH3O95157 252 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 IGKV1-17P01599 117 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 APOHP02749 345 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-207ENST00000468267 CD5P06127 495 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 BMI1P35226 326 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 NOXA1Q86UR1 476 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 ST8SIA2Q92186 375 aa12.69□□□□□ -0.38
SSBP1-207ENST00000468267 SLC25A4P12235 298 aa12.68□□□□□ -0.38
SSBP1-207ENST00000468267 NPY1RP25929 384 aa12.68□□□□□ -0.38
SSBP1-207ENST00000468267 CMC4P56277 68 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-207ENST00000468267 TIGITQ495A1 244 aa12.68□□□□□ -0.38
SSBP1-207ENST00000468267 ZFAND6Q6FIF0 208 aa12.68□□□□□ -0.38
SSBP1-207ENST00000468267 PRSS54Q6PEW0 395 aa12.68□□□□□ -0.38
SSBP1-207ENST00000468267 TCF24Q7RTU0 167 aa12.68□□□□□ -0.38
SSBP1-207ENST00000468267 LILRB2Q8N423 598 aa12.68□□□□□ -0.38
SSBP1-207ENST00000468267 SRRQ9GZT4 340 aa12.68□□□□□ -0.38
SSBP1-207ENST00000468267 DUXBA0A1W2PPF3 345 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 NPPCP23582 126 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 TFPI2P48307 235 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms