RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 TRAV6A0A075B6T7 132 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 K7EMT4 169 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 TMEM50AO95807 157 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 C8orf88P0DMB2 117 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 FOLR2P14207 255 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 CBLN1P23435 193 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 NPY1RP25929 384 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 ID3Q02535 119 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 ETFRF1Q6IPR1 90 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 UBAC2Q8NBM4 344 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 OR4X1Q8NH49 305 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 CIB3Q96Q77 187 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-206ENST00000468253 FNDC4Q9H6D8 234 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-206ENST00000468253 ZC4H2Q9NQZ6 224 aa15.2■□□□□ 0.02
NPHP4-206ENST00000468253 GNG7O60262 68 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 ADAP1O75689 374 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 IFNA10P01566 189 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 IL5P05113 134 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 SLC25A4P12235 298 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 SPNP16150 400 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 DEFB114Q30KQ6 69 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 UNQ9165/PRO28630Q6UXU0 137 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 ZNF431Q8TF32 576 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-206ENST00000468253 TMEM170AQ8WVE7 144 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 TMEM190Q8WZ59 177 aa15.19■□□□□ 0.02
NPHP4-206ENST00000468253 MRPL27Q9P0M9 148 aaKnown RBP15.19■□□□□ 0.02
NPHP4-206ENST00000468253 TRAV30A0A087WSZ9 112 aa15.18■□□□□ 0.02
NPHP4-206ENST00000468253 TMEM213A2RRL7 107 aa15.18■□□□□ 0.02
NPHP4-206ENST00000468253 SYNGR2O43760 224 aa15.18■□□□□ 0.02
NPHP4-206ENST00000468253 NXPH3O95157 252 aa15.18■□□□□ 0.02
NPHP4-206ENST00000468253 OPRK1P41145 380 aa15.18■□□□□ 0.02
NPHP4-206ENST00000468253 DEFA1P59665 94 aa15.18■□□□□ 0.02
NPHP4-206ENST00000468253 DEFA3P59666 94 aa15.18■□□□□ 0.02
NPHP4-206ENST00000468253 MLANAQ16655 118 aa15.18■□□□□ 0.02
NPHP4-206ENST00000468253 LSM4Q9Y4Z0 139 aaKnown RBP15.18■□□□□ 0.02
NPHP4-206ENST00000468253 C15orf62A8K5M9 175 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 CLN5O75503 358 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 IGHV3-48P01763 117 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 GP9P14770 177 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 GPX4P36969 197 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-206ENST00000468253 RPP30P78346 268 aaKnown RBP15.17■□□□□ 0.02
NPHP4-206ENST00000468253 TM4SF20Q53R12 229 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 DEFB121Q5J5C9 76 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 LCN12Q6JVE5 192 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 UXS1Q8NBZ7 420 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 TMEM116Q8NCL8 245 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 OR52B4Q8NGK2 314 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 ENKURQ8TC29 256 aa15.17■□□□□ 0.02
NPHP4-206ENST00000468253 IGHV3-35A0A0C4DH35 117 aa15.16■□□□□ 0.02
NPHP4-206ENST00000468253 SCGB2A1O75556 95 aa15.16■□□□□ 0.02
NPHP4-206ENST00000468253 OR4D5Q8NGN0 318 aa15.16■□□□□ 0.02
NPHP4-206ENST00000468253 CACNG8Q8WXS5 425 aa15.16■□□□□ 0.02
NPHP4-206ENST00000468253 OR10C1Q96KK4 312 aa15.16■□□□□ 0.02
NPHP4-206ENST00000468253 PRR25Q96S07 402 aa15.16■□□□□ 0.02
NPHP4-206ENST00000468253 DAZ1Q9NQZ3 744 aaKnown RBP15.16■□□□□ 0.02
NPHP4-206ENST00000468253 MPTX1A8MV57 137 aa15.15■□□□□ 0.02
NPHP4-206ENST00000468253 RAB11AP62491 216 aa15.15■□□□□ 0.02
NPHP4-206ENST00000468253 PRSS54Q6PEW0 395 aa15.15■□□□□ 0.02
NPHP4-206ENST00000468253 C12orf45Q8N5I9 185 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-206ENST00000468253 ZNF414Q96IQ9 312 aa15.15■□□□□ 0.02
NPHP4-206ENST00000468253 IFNA4P05014 189 aa15.14■□□□□ 0.01
NPHP4-206ENST00000468253 NKX2-1P43699 371 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-206ENST00000468253 CD69Q07108 199 aa15.14■□□□□ 0.01
NPHP4-206ENST00000468253 IAH1Q2TAA2 248 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-206ENST00000468253 CD300EQ496F6 205 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-206ENST00000468253 ZNF600Q6ZNG1 722 aa15.14■□□□□ 0.01
NPHP4-206ENST00000468253 NRARPQ7Z6K4 114 aa15.14■□□□□ 0.01
NPHP4-206ENST00000468253 HAPLN4Q86UW8 402 aa15.14■□□□□ 0.01
NPHP4-206ENST00000468253 DYNLRB2Q8TF09 96 aa15.14■□□□□ 0.01
NPHP4-206ENST00000468253 SEC22CQ9BRL7 303 aa15.14■□□□□ 0.01
NPHP4-206ENST00000468253 MARVELD1Q9BSK0 173 aa15.14■□□□□ 0.01
NPHP4-206ENST00000468253 MRPL36Q9P0J6 103 aaKnown RBP15.14■□□□□ 0.01
NPHP4-206ENST00000468253 TRAV25A0A0B4J276 109 aa15.13■□□□□ 0.01
NPHP4-206ENST00000468253 TGP01266 2768 aa15.13■□□□□ 0.01
NPHP4-206ENST00000468253 C11orf87Q6NUJ2 197 aa15.13■□□□□ 0.01
NPHP4-206ENST00000468253 ZBTB8BQ8NAP8 495 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-206ENST00000468253 MAGT1Q9H0U3 335 aa15.13■□□□□ 0.01
NPHP4-206ENST00000468253 ZNF785A8K8V0 405 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 SNRPGP15A8MWD9 76 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 WRBO00258 174 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 PRAF2O60831 178 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 YIF1AO95070 293 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 IGKV1-17P01599 117 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 IAPPP10997 89 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 TOMM20LQ6UXN7 152 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 OR1S2Q8NGQ3 325 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 SMIM8Q96KF7 97 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 C20orf24Q9BUV8 137 aa15.12■□□□□ 0.01
NPHP4-206ENST00000468253 GPN1Q9HCN4 374 aaPredicted RBP15.12■□□□□ 0.01
NPHP4-206ENST00000468253 TRAV14DV4A0A0A6YYC5 116 aa15.11■□□□□ 0.01
NPHP4-206ENST00000468253 IZUMO1RA6ND01 250 aa15.11■□□□□ 0.01
NPHP4-206ENST00000468253 INMT-MINDY4F8WBC2 141 aa15.11■□□□□ 0.01
NPHP4-206ENST00000468253 TAS2R30P59541 319 aa15.11■□□□□ 0.01
NPHP4-206ENST00000468253 YPEL3P61236 119 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-206ENST00000468253 POLR2GP62487 172 aaKnown RBP eCLIP15.11■□□□□ 0.01
NPHP4-206ENST00000468253 Q8N1Y9 231 aa15.11■□□□□ 0.01
NPHP4-206ENST00000468253 GINS3Q9BRX5 216 aa15.11■□□□□ 0.01
NPHP4-206ENST00000468253 MLXQ9UH92 298 aa15.11■□□□□ 0.01
NPHP4-206ENST00000468253 SMPXQ9UHP9 88 aa15.11■□□□□ 0.01
NPHP4-206ENST00000468253 SMAD5-AS1Q9Y6J3 95 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms