RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PIGBOS1A0A0B4J2F0 54 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 TSPAN4O14817 238 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 SFT2D2O95562 160 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 NPBWR1P48145 328 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 TNFRSF9Q07011 255 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 SMCO1Q147U7 214 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 GUCA2BQ16661 112 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 ANKRD55Q3KP44 614 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 TMED4Q7Z7H5 227 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 SLC24A4Q8NFF2 622 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 OR4X1Q8NH49 305 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 ZFAND3Q9H8U3 227 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 SELENOKQ9Y6D0 94 aa11.35□□□□□ -0.59
ATG4B-215ENST00000468018 IGHV3OR16-8A0A075B7F1 116 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 A0A1B0GU03 582 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 CLN5O75503 358 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 NDUFB6O95139 128 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 SLC25A6P12236 298 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 OPRK1P41145 380 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 UBE2MP61081 183 aaKnown RBP11.34□□□□□ -0.59
ATG4B-215ENST00000468018 MLANAQ16655 118 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 HAGHQ16775 308 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 TRIQKQ629K1 86 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 RNASEH2CQ8TDP1 164 aaKnown RBP11.34□□□□□ -0.59
ATG4B-215ENST00000468018 RCHY1Q96PM5 261 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 SPAG8Q99932 426 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-215ENST00000468018 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
ATG4B-215ENST00000468018 C20orf24Q9BUV8 137 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 WFDC10AQ9H1F0 79 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 HEYLQ9NQ87 328 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-215ENST00000468018 SMPXQ9UHP9 88 aa11.34□□□□□ -0.59
ATG4B-215ENST00000468018 IGHV7-4-1A0A0J9YVY3 117 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 RBMY1BA6NDE4 496 aaKnown RBP11.33□□□□□ -0.6
ATG4B-215ENST00000468018 RBMY1EA6NEQ0 496 aaKnown RBP11.33□□□□□ -0.6
ATG4B-215ENST00000468018 CEBPZOSA8MTT3 80 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 OR11H12B2RN74 326 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 CHEK1O14757 476 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 SCAF4O95104 1147 aaKnown RBP11.33□□□□□ -0.6
ATG4B-215ENST00000468018 RBMY1DP0C7P1 496 aaKnown RBP11.33□□□□□ -0.6
ATG4B-215ENST00000468018 IL7P13232 177 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 TOMM20LQ6UXN7 152 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 ZNF600Q6ZNG1 722 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 LINC00299Q6ZSB3 139 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 CENPSQ8N2Z9 138 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
ATG4B-215ENST00000468018 DNAH7Q8WXX0 4024 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 ZNF207O43670 478 aaKnown RBP11.32□□□□□ -0.6
ATG4B-215ENST00000468018 IGKV1-17P01599 117 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 FAM90A2PQ658T7 463 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 PRSS54Q6PEW0 395 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 RBPMS2Q6ZRY4 209 aaKnown RBP11.32□□□□□ -0.6
ATG4B-215ENST00000468018 SLC16A13Q7RTY0 426 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 TMEM116Q8NCL8 245 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 RBKSQ9H477 322 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 TMED3Q9Y3Q3 217 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 U3KQ87 197 aa11.32□□□□□ -0.6
ATG4B-215ENST00000468018 TRAV14DV4A0A0A6YYC5 116 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 RPS10-NUDT3A0A1W2PQS6 291 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 PLA2G10O15496 165 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 NXPH3O95157 252 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 IGLC1P0CG04 106 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 VAMP1P23763 118 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 NPY1RP25929 384 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 OR52B4Q8NGK2 314 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 DTD1Q8TEA8 209 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 RNF2Q99496 336 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 FAM110AQ9BQ89 295 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 HIPK2Q9H2X6 1198 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 TUBA4BQ9H853 241 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 SRD5A3Q9H8P0 318 aa11.31□□□□□ -0.6
ATG4B-215ENST00000468018 PUS1Q9Y606 427 aaKnown RBP eCLIP11.31□□□□□ -0.6
ATG4B-215ENST00000468018 KMT2CQ8NEZ4 4911 aaKnown RBP11.31□□□□□ -0.6
ATG4B-215ENST00000468018 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 C9orf170A2RU37 121 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 A6NHS1 94 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 SLC25A4P12235 298 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 INPP1P49441 399 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 ATP5IP56385 69 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-215ENST00000468018 LAMTOR1Q6IAA8 161 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 NOXA1Q86UR1 476 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 CITED4Q96RK1 184 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 SPATA25Q9BR10 227 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 GINS3Q9BRX5 216 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 FLVCR2Q9UPI3 526 aa11.3□□□□□ -0.6
ATG4B-215ENST00000468018 YIF1AO95070 293 aa11.29□□□□□ -0.6
ATG4B-215ENST00000468018 DHRS2Q13268 280 aa11.29□□□□□ -0.6
ATG4B-215ENST00000468018 ODF3L2Q3SX64 289 aa11.29□□□□□ -0.6
ATG4B-215ENST00000468018 OR1S2Q8NGQ3 325 aa11.29□□□□□ -0.6
ATG4B-215ENST00000468018 OR1S1Q8NH92 325 aa11.29□□□□□ -0.6
ATG4B-215ENST00000468018 APOHP02749 345 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-215ENST00000468018 OR4E1P0C645 316 aa11.28□□□□□ -0.6
ATG4B-215ENST00000468018 RND2P52198 227 aa11.28□□□□□ -0.6
ATG4B-215ENST00000468018 YPEL3P61236 119 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-215ENST00000468018 CNPY1Q3B7I2 92 aa11.28□□□□□ -0.6
ATG4B-215ENST00000468018 TIGITQ495A1 244 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms