RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 RAB3DO95716 219 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 APOC4P55056 127 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 KMT2AQ03164 3969 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 TNFRSF9Q07011 255 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 MLANAQ16655 118 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 GBGT1Q8N5D6 347 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 MARCH1Q8TCQ1 289 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 ST8SIA2Q92186 375 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 TRIM63Q969Q1 353 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 ZNF486Q96H40 463 aaPredicted RBP10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 PRRT1Q99946 306 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 MAP6D1Q9H9H5 199 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 TP53TG1Q9Y2A0 90 aa10.88□□□□□ -0.67
ATPAF2-204ENST00000467560 FRAS1Q86XX4 4008 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 KIR2DL5BA0A0G2JN68 375 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 KIR2DL5BA0A0G2JPC4 375 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 DISC1C4P0D8 188 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 INS-IGF2F8WCM5 200 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 GNG7O60262 68 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 BMI1P35226 326 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 AKR1C2P52895 323 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 ERHP84090 104 aaKnown RBP10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 SURF2Q15527 256 aaPredicted RBP10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 SCGB2B2Q4G0G5 96 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 KIR2DL5AQ8N109 375 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 TOMM5Q8N4H5 51 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 FAM24BQ8N5W8 94 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 KIR2DL5BQ8NHK3 375 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 TERB2Q8NHR7 220 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 LHFPL5Q8TAF8 219 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 CCDC32Q9BV29 185 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 WDR12Q9GZL7 423 aaKnown RBP10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 DNAH10Q8IVF4 4471 aa10.87□□□□□ -0.67
ATPAF2-204ENST00000467560 CXorf65A6NEN9 183 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 UBE2CO00762 179 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 TMEM50AO95807 157 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 IFNA17P01571 189 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 UCP1P25874 307 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 GALNT14Q96FL9 552 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 SCGB3A2Q96PL1 93 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 C7orf50Q9BRJ6 194 aaKnown RBP10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 RTBDNQ9BSG5 229 aaPredicted RBP10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 COPZ2Q9P299 210 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 SCP2D1Q9UJQ7 156 aa10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 PUS1Q9Y606 427 aaKnown RBP eCLIP10.86□□□□□ -0.67
ATPAF2-204ENST00000467560 NAP1L6A6NFF2 107 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 DFFBO76075 338 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 SNCAP37840 140 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 KLF9Q13886 244 aaPredicted RBP10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 TRIQKQ629K1 86 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 TCF24Q7RTU0 167 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 DUSP18Q8NEJ0 188 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 OR4C16Q8NGL9 310 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 ZFAND1Q8TCF1 268 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 LINC00476Q8WZB0 136 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 VSIRQ9H7M9 311 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 VPS13DQ5THJ4 4388 aa10.85□□□□□ -0.67
ATPAF2-204ENST00000467560 B3GALNT1O75752 331 aa10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 OR5AC1P0C628 307 aa10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 NPBWR1P48145 328 aa10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 INPP1P49441 399 aa10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 ZNF846Q147U1 533 aa10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 BSXQ3C1V8 233 aa10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 GLYATL2Q8WU03 294 aa10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 SDHCQ99643 169 aaPredicted RBP10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
ATPAF2-204ENST00000467560 CENPXA8MT69 81 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 CDS2O95674 445 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 IL7P13232 177 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 HOXA1P49639 335 aaPredicted RBP10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 AARDQ4LEZ3 155 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 LEMD1Q68G75 181 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 ZNF600Q6ZNG1 722 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 SELENOHQ8IZQ5 122 aaKnown RBP10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 CCDC71LQ8N9Z2 235 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 TMEM170AQ8WVE7 144 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 SLC25A21Q9BQT8 299 aaPredicted RBP10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 TMEM222Q9H0R3 208 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 CSTL1Q9H114 145 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 PRR13Q9NZ81 148 aa10.83□□□□□ -0.68
ATPAF2-204ENST00000467560 MPTX1A8MV57 137 aa10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 CLN5O75503 358 aa10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 IGKV1-17P01599 117 aa10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 BAK1Q16611 211 aa10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 TIGITQ495A1 244 aa10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 CEMP1Q6PRD7 247 aaPredicted RBP10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 GPR146Q96CH1 333 aa10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 RRNAD1Q96FB5 475 aaKnown RBP10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 GINS3Q9BRX5 216 aa10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 NAA60Q9H7X0 242 aa10.82□□□□□ -0.68
ATPAF2-204ENST00000467560 TEX13DA0A0J9YY54 714 aaPredicted RBP10.81□□□□□ -0.68
ATPAF2-204ENST00000467560 ATG12O94817 140 aa10.81□□□□□ -0.68
ATPAF2-204ENST00000467560 LY6G6CO95867 125 aa10.81□□□□□ -0.68
ATPAF2-204ENST00000467560 OPRK1P41145 380 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms