RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 Q6ZSR3 168 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 SMIM5Q71RC9 77 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 FAM19A1Q7Z5A9 133 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 GATD1Q8NB37 220 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF740Q8NDX6 193 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 OR2M3Q8NG83 312 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 OR51G1Q8NGK1 321 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 OR5AR1Q8NGP9 310 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 OR10D3Q8NH80 312 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 OR1F12Q8NHA8 337 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 PPTC7Q8NI37 304 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 PLPPR1Q8TBJ4 325 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 RDH5Q92781 318 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 NEIL2Q969S2 332 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 STARD4Q96DR4 205 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 TVP23CQ96ET8 276 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 SEC22AQ96IW7 307 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 NAA38Q9BRA0 125 aaKnown RBP2.48□□□□□ -2.01
VPS13D-203ENST00000466732 PRADC1Q9BSG0 188 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 SCRT1Q9BWW7 348 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 GABARAPL3Q9BY60 117 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 SH3BGRL3Q9H299 93 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 RERGLQ9H628 205 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 CLCF1Q9UBD9 225 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 GNG12Q9UBI6 72 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 AK3Q9UIJ7 227 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 LSM2Q9Y333 95 aaKnown RBP2.48□□□□□ -2.01
VPS13D-203ENST00000466732 LINC00312Q9Y6C7 94 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 MED12LQ86YW9 2145 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 NRAPQ86VF7 1730 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 NUP210Q8TEM1 1887 aaPredicted RBP2.48□□□□□ -2.01
VPS13D-203ENST00000466732 SHROOM3Q8TF72 1996 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 NUMA1Q14980 2115 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TRGV10A0A0A0MS01 117 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 LOC102725191A0A1B0GVB3 256 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TRDV1A0A1B0GX56 115 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 OR51F1A6NGY5 319 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF727A8MUV8 499 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 FXYD1O00168 92 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 PLPP1O14494 284 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 NPFFO15130 113 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 RAMP1O60894 148 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 MPDU1O75352 247 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 ATP5LO75964 103 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 NDUFB6O95139 128 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 C1QAP02745 245 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 REG1AP05451 166 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 GPX1P07203 203 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 SCTP09683 121 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 LINC00032P0C843 101 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 LINC00694P0DN24 101 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 SLC25A6P12236 298 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 CNTFRP26992 372 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 CRYBB3P26998 211 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TNFSF9P41273 254 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 LPAR6P43657 344 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 REG1BP48304 166 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 FABP6P51161 128 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 P2RX1P51575 399 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 EFNB2P52799 333 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 CLDN6P56747 220 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 H2BFSP57053 126 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TAS2R46P59540 309 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 PFN3P60673 137 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 RPL31P62899 125 aaKnown RBP2.47□□□□□ -2.01
VPS13D-203ENST00000466732 FOXF1Q12946 379 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 C1orf61Q13536 156 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 PMCHL1Q16048 86 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 Q6AWC8 147 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 Q6P435 159 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 LEG1Q6P5S2 330 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TRIM40Q6P9F5 258 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 DPPA3Q6W0C5 159 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 STAC2Q6ZMT1 411 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 Q6ZUT4 128 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 LRP11Q86VZ4 500 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 SLC35F2Q8IXU6 374 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 ZIC4Q8N9L1 334 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 Q8N9L7 120 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 LINC01555Q8NAE3 123 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM229BQ8NBD8 167 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 OR52P1PQ8NH57 321 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 OR10G6Q8NH81 332 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 ATP6V0E2Q8NHE4 81 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 VSTM2AQ8TAG5 236 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 CMTM2Q8TAZ6 248 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 SLC37A2Q8TED4 501 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM54Q969K7 222 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 DYNLL2Q96FJ2 89 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TIMD4Q96H15 378 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 MCHR1Q99705 422 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 RTBDNQ9BSG5 229 aaPredicted RBP2.47□□□□□ -2.01
VPS13D-203ENST00000466732 TSSK6Q9BXA6 273 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 MRPL32Q9BYC8 188 aaKnown RBP2.47□□□□□ -2.01
VPS13D-203ENST00000466732 SLC25A39Q9BZJ4 359 aaPredicted RBP2.47□□□□□ -2.01
VPS13D-203ENST00000466732 RHOJQ9H4E5 214 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 RETNQ9HD89 108 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 ACER3Q9NUN7 267 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 SIGLEC8Q9NYZ4 499 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms