RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 C2orf70A6NJV1 201 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 F8W735 103 aaPredicted RBP9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 CORTO00230 105 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 WRBO00258 174 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 CCSO14618 274 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 PITX3O75364 302 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 MED6O75586 246 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 IFNA4P05014 189 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 CTSGP08311 255 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 ADMP35318 185 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 NPBWR1P48145 328 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 DEFA1P59665 94 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 DEFA3P59666 94 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 SPSB3Q6PJ21 355 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 NRARPQ7Z6K4 114 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 ZNF431Q8TF32 576 aaPredicted RBP9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 MITD1Q8WV92 249 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 FNDC4Q9H6D8 234 aaPredicted RBP9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 PALMDQ9NP74 551 aa9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 MRPL36Q9P0J6 103 aaKnown RBP9.15□□□□□ -0.94
SHROOM3-202ENST00000466541 IGHV3-49A0A0A0MS15 119 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 IZUMO1RA6ND01 250 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 C5orf51A6NDU8 294 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 LGALS9O00182 355 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 IGLV1-51P01701 117 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 SLC25A6P12236 298 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 GP9P14770 177 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 CBLN1P23435 193 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 IAH1Q2TAA2 248 aaPredicted RBP9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 BSXQ3C1V8 233 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 C2orf83Q53S99 150 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 ADAMTSL5Q6ZMM2 481 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 TMEM170AQ8WVE7 144 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 OR10C1Q96KK4 312 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 TXN2Q99757 166 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 GAR1Q9NY12 217 aaKnown RBP9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 U3KQ87 197 aa9.14□□□□□ -0.95
SHROOM3-202ENST00000466541 RPS10-NUDT3A0A1W2PQS6 291 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 TMEM213A2RRL7 107 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 H3BP45 60 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 SYNGR2O43760 224 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 SSSCA1O60232 199 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 RND2P52198 227 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 POLR2GP62487 172 aaKnown RBP eCLIP9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 RELQ04864 619 aaPredicted RBP9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 GUCA2BQ16661 112 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 CD300EQ496F6 205 aaPredicted RBP9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 SPANXN5Q5MJ07 72 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 C12orf45Q8N5I9 185 aaPredicted RBP9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 ACY3Q96HD9 319 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 ZNF436Q9C0F3 470 aaPredicted RBP9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 UFC1Q9Y3C8 167 aa9.13□□□□□ -0.95
SHROOM3-202ENST00000466541 FAM90A26D6RGX4 464 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 INMT-MINDY4F8WBC2 141 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 NDUFA4O00483 81 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 TMEM50AO95807 157 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 NKX2-1P43699 371 aaPredicted RBP9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 DEFB114Q30KQ6 69 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 TIGITQ495A1 244 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 PVRIGQ6DKI7 326 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 PRSS54Q6PEW0 395 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 BTNL8Q6UX41 500 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 RNASEH2CQ8TDP1 164 aaKnown RBP9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 TMEM190Q8WZ59 177 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 MLXQ9UH92 298 aa9.12□□□□□ -0.95
SHROOM3-202ENST00000466541 IGHV3OR16-13A0A075B7E8 117 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 IGHV3-74A0A0B4J1X5 117 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 CLN5O75503 358 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 SCAF4O95104 1147 aaKnown RBP9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 RAB11AP62491 216 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 RPP30P78346 268 aaKnown RBP9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 ETFRF1Q6IPR1 90 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 LCN12Q6JVE5 192 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 SLC16A13Q7RTY0 426 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 ZBTB8BQ8NAP8 495 aaPredicted RBP9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 OR4D5Q8NGN0 318 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 OR4X1Q8NH49 305 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 NPIPB3Q92617 1050 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 WDR89Q96FK6 387 aaPredicted RBP9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 CIB3Q96Q77 187 aaPredicted RBP9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 ATP6V0BQ99437 205 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 GPN1Q9HCN4 374 aaPredicted RBP9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 DAZ1Q9NQZ3 744 aaKnown RBP9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 PSENENQ9NZ42 101 aa9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 PUS1Q9Y606 427 aaKnown RBP eCLIP9.11□□□□□ -0.95
SHROOM3-202ENST00000466541 IGHV3-66A0A0C4DH42 116 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 C15orf62A8K5M9 175 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 A8MWP6 167 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 SCGB2A1O75556 95 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 SLC25A4P12235 298 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 OR10J1P30954 320 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 FCGR2BP31994 310 aaPredicted RBP9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 ID3Q02535 119 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 CD69Q07108 199 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 TOMM20LQ6UXN7 152 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 ZNF600Q6ZNG1 722 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 SIGLEC8Q9NYZ4 499 aa9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 TECRQ9NZ01 308 aaKnown RBP9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 MRPL27Q9P0M9 148 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms