RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 GPR107Q5VW38 600 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 SLC35G3Q8N808 338 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 CMTM3Q96MX0 182 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 GINS3Q9BRX5 216 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 RABAC1Q9UI14 185 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 PKHD1P08F94 4074 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 CD3DP04234 171 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 PGAM2P15259 253 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 AKR1C2P52895 323 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 TMBIM6P55061 237 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 ERHP84090 104 aaKnown RBP14.96□□□□□ -0.01
COL6A1-203ENST00000466285 TMEM187Q14656 261 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 LPCAT3Q6P1A2 487 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 Q6ZRM9 215 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 TRPT1Q86TN4 253 aaKnown RBP14.96□□□□□ -0.01
COL6A1-203ENST00000466285 DUSP18Q8NEJ0 188 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 OR52I2Q8NH67 350 aa14.96□□□□□ -0.01
COL6A1-203ENST00000466285 IGHV4-28A0A0C4DH34 117 aa14.95□□□□□ -0.02
COL6A1-203ENST00000466285 K7EQG2 157 aa14.95□□□□□ -0.02
COL6A1-203ENST00000466285 HOXA1P49639 335 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-203ENST00000466285 RPL11P62913 178 aaKnown RBP14.95□□□□□ -0.02
COL6A1-203ENST00000466285 TIGITQ495A1 244 aa14.95□□□□□ -0.02
COL6A1-203ENST00000466285 STXBP6Q8NFX7 210 aa14.95□□□□□ -0.02
COL6A1-203ENST00000466285 RAB2BQ8WUD1 216 aa14.95□□□□□ -0.02
COL6A1-203ENST00000466285 APLNQ9ULZ1 77 aa14.95□□□□□ -0.02
COL6A1-203ENST00000466285 DYNC1H1Q14204 4646 aaKnown RBP14.94□□□□□ -0.02
COL6A1-203ENST00000466285 INS-IGF2F8WCM5 200 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 DNASE2O00115 360 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-203ENST00000466285 IGKV1-17P01599 117 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 ZNF688P0C7X2 276 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 S100GP29377 79 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 NPBWR1P48145 328 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 FAAP20Q6NZ36 180 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 CLVS1Q8IUQ0 354 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-203ENST00000466285 LHFPL5Q8TAF8 219 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 CLEC5AQ9NY25 188 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 X6R8D5 127 aa14.94□□□□□ -0.02
COL6A1-203ENST00000466285 ELOA3CA0A087WX78 387 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-203ENST00000466285 C3orf85A0A1B0GTC6 90 aa14.93□□□□□ -0.02
COL6A1-203ENST00000466285 IFNA17P01571 189 aa14.93□□□□□ -0.02
COL6A1-203ENST00000466285 P2RY1P47900 373 aa14.93□□□□□ -0.02
COL6A1-203ENST00000466285 CMC4P56277 68 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-203ENST00000466285 BSXQ3C1V8 233 aa14.93□□□□□ -0.02
COL6A1-203ENST00000466285 OR13C8Q8NGS7 320 aa14.93□□□□□ -0.02
COL6A1-203ENST00000466285 DCANP1Q8TF63 244 aa14.93□□□□□ -0.02
COL6A1-203ENST00000466285 SCRT1Q9BWW7 348 aa14.93□□□□□ -0.02
COL6A1-203ENST00000466285 MFFQ9GZY8 342 aa14.93□□□□□ -0.02
COL6A1-203ENST00000466285 TRAV2A0A0B4J234 112 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 CLN5O75503 358 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 SNCAP37840 140 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 OPRK1P41145 380 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 PAFAH1B2P68402 229 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 RNASE10Q5GAN6 216 aaKnown RBP14.92□□□□□ -0.02
COL6A1-203ENST00000466285 STHQ8IWL8 128 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 C2CD4CQ8TF44 421 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 TMEM170AQ8WVE7 144 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 ABHD1Q96SE0 405 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 CELA1Q9UNI1 258 aa14.92□□□□□ -0.02
COL6A1-203ENST00000466285 SMIM31A0A1B0GVY4 71 aa14.91□□□□□ -0.02
COL6A1-203ENST00000466285 IGLL5B9A064 214 aa14.91□□□□□ -0.02
COL6A1-203ENST00000466285 H3BMQ9 156 aa14.91□□□□□ -0.02
COL6A1-203ENST00000466285 ZNF701M0R085 212 aaPredicted RBP14.91□□□□□ -0.02
COL6A1-203ENST00000466285 CRYBB3P26998 211 aa14.91□□□□□ -0.02
COL6A1-203ENST00000466285 TRIM16LQ309B1 348 aa14.91□□□□□ -0.02
COL6A1-203ENST00000466285 Q6ZTC4 211 aa14.91□□□□□ -0.02
COL6A1-203ENST00000466285 ZNF767PQ75MW2 155 aa14.91□□□□□ -0.02
COL6A1-203ENST00000466285 MARCH1Q8TCQ1 289 aa14.91□□□□□ -0.02
COL6A1-203ENST00000466285 FAM25AB3EWG3 89 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 FAM25CB3EWG5 89 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 FAM25GB3EWG6 89 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 IFNA4P05014 189 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 UCP1P25874 307 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 HLA-DMBP28068 263 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 SPCS2Q15005 226 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 GSG1LQ6UXU4 331 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 OR4X1Q8NH49 305 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 ZNF486Q96H40 463 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-203ENST00000466285 EXTL2Q9UBQ6 330 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 MTFP1Q9UDX5 166 aa14.9□□□□□ -0.02
COL6A1-203ENST00000466285 NXPH3O95157 252 aa14.89□□□□□ -0.03
COL6A1-203ENST00000466285 NPPCP23582 126 aa14.89□□□□□ -0.03
COL6A1-203ENST00000466285 ACTL10Q5JWF8 245 aa14.89□□□□□ -0.03
COL6A1-203ENST00000466285 ARRDC1Q8N5I2 433 aa14.89□□□□□ -0.03
COL6A1-203ENST00000466285 CSNK1G2-AS1Q8NCQ2 148 aa14.89□□□□□ -0.03
COL6A1-203ENST00000466285 METTL26Q96S19 204 aa14.89□□□□□ -0.03
COL6A1-203ENST00000466285 MIXL1Q9H2W2 232 aa14.89□□□□□ -0.03
COL6A1-203ENST00000466285 U3KQE9 123 aa14.89□□□□□ -0.03
COL6A1-203ENST00000466285 ZNF705EA8MWA4 302 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-203ENST00000466285 OR5AC1P0C628 307 aa14.88□□□□□ -0.03
COL6A1-203ENST00000466285 IGLC1P0CG04 106 aa14.88□□□□□ -0.03
COL6A1-203ENST00000466285 MEF2DQ14814 521 aa14.88□□□□□ -0.03
COL6A1-203ENST00000466285 USF2Q15853 346 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-203ENST00000466285 DYNC2LI1Q8TCX1 351 aa14.88□□□□□ -0.03
COL6A1-203ENST00000466285 GLMPQ8WWB7 406 aa14.88□□□□□ -0.03
COL6A1-203ENST00000466285 PRR13Q9NZ81 148 aa14.88□□□□□ -0.03
COL6A1-203ENST00000466285 CD74P04233 296 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 CD5P06127 495 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 RND2P52198 227 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 DEFB1P60022 68 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 SCGB2B2Q4G0G5 96 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms