RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 OPRK1P41145 380 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 CDX1P47902 265 aaPredicted RBP8.62□□□□□ -1.03
VCP-204ENST00000466100 ATP5G2Q06055 141 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 BAXQ07812 192 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 OR8G2PQ6IF36 304 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 ZNF343Q6P1L6 599 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 C18orf65Q6ZTR6 163 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 ACOT7LQ6ZUV0 252 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 SLC16A13Q7RTY0 426 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 PINX1Q96BK5 328 aaKnown RBP8.62□□□□□ -1.03
VCP-204ENST00000466100 ATP6V0BQ99437 205 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 SLC25A31Q9H0C2 315 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 PAIP2BQ9ULR5 123 aaKnown RBP8.62□□□□□ -1.03
VCP-204ENST00000466100 HSPB11Q9Y547 144 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 S4R3C0 116 aa8.62□□□□□ -1.03
VCP-204ENST00000466100 TCRBV4S1A1TA0A5B7 111 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 HMSDA8MTL9 139 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 FNDC10F2Z333 226 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 I3L521 148 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 SCAF4O95104 1147 aaKnown RBP8.61□□□□□ -1.03
VCP-204ENST00000466100 IGHV3-11P01762 117 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 IGHV3-48P01763 117 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 LGALS1P09382 135 aaKnown RBP8.61□□□□□ -1.03
VCP-204ENST00000466100 DLK1P80370 383 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 RUNX1Q01196 453 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 NHLH2Q02577 135 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 SLC38A11Q08AI6 406 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 GAMTQ14353 236 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 VWC2Q2TAL6 325 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 ZNF546Q86UE3 836 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 STX12Q86Y82 276 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 TMEM116Q8NCL8 245 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 OR4X1Q8NH49 305 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 CACNG8Q8WXS5 425 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 ZNF414Q96IQ9 312 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 CXorf58Q96LI9 332 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 MDFIQ99750 246 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 C21orf62Q9NYP8 219 aa8.61□□□□□ -1.03
VCP-204ENST00000466100 TSSC4Q9Y5U2 329 aaPredicted RBP8.61□□□□□ -1.03
VCP-204ENST00000466100 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.6□□□□□ -1.03
VCP-204ENST00000466100 TRBV7-1A0A0A6YYK4 115 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 RPS10-NUDT3A0A1W2PQS6 291 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 TRBV12-3P01733 135 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 IGHV3-23P01764 117 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 TMEM217Q8N7C4 229 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 OR10P1Q8NGE3 313 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 C4orf3Q8WVX3 66 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 EEF1AKMT3Q96AZ1 226 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 ZNF747Q9BV97 191 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 GGACTQ9BVM4 153 aa8.6□□□□□ -1.03
VCP-204ENST00000466100 IGKV1D-37A0A075B6S9 117 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 IGKV1OR2-108A0A075B7D4 117 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 ARPC5O15511 151 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 S100A11P31949 105 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 RND2P52198 227 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 MFAP4P55083 255 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 ZNF345Q14585 488 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 KHDC1LQ5JSQ8 128 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 ETFRF1Q6IPR1 90 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 NDUFA11Q86Y39 141 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 THAP8Q8NA92 274 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 KLHL30-AS1Q8NEE0 82 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 OR5C1Q8NGR4 320 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 OR5B12Q96R08 314 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 TXN2Q99757 166 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 FBXL17Q9UF56 701 aa8.59□□□□□ -1.03
VCP-204ENST00000466100 OR2T8A6NH00 312 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 BMPR1BO00238 502 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 CLN5O75503 358 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 IGKV1-17P01599 117 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 IGLC1P0CG04 106 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 CXCL2P19875 107 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 GPR183P32249 361 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 ADMP35318 185 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 HBG1P69891 147 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 HBG2P69892 147 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 FHL3Q13643 280 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 DEFB136Q30KP8 78 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 ZFP69Q49AA0 526 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 FAM209BQ5JX69 171 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 ACSM6Q6P461 480 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 TREML4Q6UXN2 200 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 CLEC19AQ6UXS0 136 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 TMEM144Q7Z5S9 345 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 KCNRGQ8N5I3 272 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 INO80EQ8NBZ0 244 aaPredicted RBP8.58□□□□□ -1.04
VCP-204ENST00000466100 OR1S2Q8NGQ3 325 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 NPIPB3Q92617 1050 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 SLC35E1Q96K37 410 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 CHRDL1Q9BU40 450 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 TMEM147Q9BVK8 224 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 WFDC1Q9HC57 220 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 UQCC1Q9NVA1 299 aa8.58□□□□□ -1.04
VCP-204ENST00000466100 LSM4Q9Y4Z0 139 aaKnown RBP8.58□□□□□ -1.04
VCP-204ENST00000466100 DNAH3Q8TD57 4116 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 IGHV4OR15-8A0A075B7B6 117 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 A0A087WW49 117 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 A0A1W2PRX2 142 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms