RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 OR5A1Q8NGJ0 315 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 DNAJC9Q8WXX5 260 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 LINC00526Q96FQ7 95 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 ERGIC3Q9Y282 383 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 PKIGQ9Y2B9 76 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 NOSIPQ9Y314 301 aaKnown RBP0.91□□□□□ -2.26
LRCH3-211ENST00000466054 IGKV1-9A0A0C4DH69 117 aa0.9□□□□□ -2.27
LRCH3-211ENST00000466054 C2orf70A6NJV1 201 aa0.9□□□□□ -2.27
LRCH3-211ENST00000466054 BUB1B-PAK6H3BSN5 160 aa0.9□□□□□ -2.27
LRCH3-211ENST00000466054 C19orf84I3L1E1 186 aa0.9□□□□□ -2.27
LRCH3-211ENST00000466054 HYPMO75409 117 aa0.9□□□□□ -2.27
LRCH3-211ENST00000466054 HIST3H2BBQ8N257 126 aa0.9□□□□□ -2.27
LRCH3-211ENST00000466054 ULBP3Q9BZM4 244 aa0.9□□□□□ -2.27
LRCH3-211ENST00000466054 TAS2R4Q9NYW5 299 aa0.9□□□□□ -2.27
LRCH3-211ENST00000466054 ADCY9O60503 1353 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 TRBV6-7A0A0A0MS04 114 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 OR4C46A6NHA9 309 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 CLDN24A6NM45 220 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 CRYZL1O95825 349 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 TTRP02766 147 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 SMIM10L2AP0DMW4 78 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 SMIM10L2BP0DMW5 78 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 OMPP47874 163 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 RPS20P60866 119 aaKnown RBP0.89□□□□□ -2.27
LRCH3-211ENST00000466054 CDC42P60953 191 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 RAB4BP61018 213 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 CLDN22Q8N7P3 220 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 KLK9Q9UKQ9 250 aa0.89□□□□□ -2.27
LRCH3-211ENST00000466054 NEO1Q92859 1461 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 TRAV26-2A0A0B4J265 109 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 PIRO00625 290 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 RBP1P09455 135 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 RHOGP84095 191 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 TRAPPC6BQ86SZ2 158 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 OOSP2Q86WS3 158 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 TMEM147Q9BVK8 224 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 DCSTAMPQ9H295 470 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 PARVGQ9HBI0 331 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 NHP2Q9NX24 153 aaKnown RBP0.88□□□□□ -2.27
LRCH3-211ENST00000466054 EML6Q6ZMW3 1958 aa0.88□□□□□ -2.27
LRCH3-211ENST00000466054 TRAV1-1A0A0B4J248 108 aa0.87□□□□□ -2.27
LRCH3-211ENST00000466054 OR2J2O76002 312 aa0.87□□□□□ -2.27
LRCH3-211ENST00000466054 UBL3O95164 117 aa0.87□□□□□ -2.27
LRCH3-211ENST00000466054 OR6V1Q8N148 313 aa0.87□□□□□ -2.27
LRCH3-211ENST00000466054 ZNF418Q8TF45 676 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-211ENST00000466054 BORCS7Q96B45 105 aa0.87□□□□□ -2.27
LRCH3-211ENST00000466054 C8orf76Q96K31 380 aa0.87□□□□□ -2.27
LRCH3-211ENST00000466054 HS3ST2Q9Y278 367 aa0.87□□□□□ -2.27
LRCH3-211ENST00000466054 NCOA6Q14686 2063 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-211ENST00000466054 ECM29Q5VYK3 1845 aa0.87□□□□□ -2.27
LRCH3-211ENST00000466054 LAMB4A4D0S4 1761 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 M0R2N4 97 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 KPNA3O00505 521 aaPredicted RBP0.86□□□□□ -2.27
LRCH3-211ENST00000466054 S100A4P26447 101 aaKnown RBP0.86□□□□□ -2.27
LRCH3-211ENST00000466054 ZNF93P35789 620 aaPredicted RBP0.86□□□□□ -2.27
LRCH3-211ENST00000466054 SSR2P43308 183 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 CEBPGP53567 150 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 YPEL3P61236 119 aaPredicted RBP0.86□□□□□ -2.27
LRCH3-211ENST00000466054 IAH1Q2TAA2 248 aaPredicted RBP0.86□□□□□ -2.27
LRCH3-211ENST00000466054 TRAPPC5Q8IUR0 188 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 CCDC42Q96M95 316 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 CMSS1Q9BQ75 279 aaKnown RBP0.86□□□□□ -2.27
LRCH3-211ENST00000466054 PARD6GQ9BYG4 376 aaPredicted RBP0.86□□□□□ -2.27
LRCH3-211ENST00000466054 CCDC90BQ9GZT6 254 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 OSTCQ9NRP0 149 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 HECW2Q9P2P5 1572 aa0.86□□□□□ -2.27
LRCH3-211ENST00000466054 ADGRB2O60241 1585 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 PROSCO94903 275 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 LINC01554Q52M75 96 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 KRT222Q8N1A0 295 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 Q8N814 137 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 OR10J5Q8NHC4 309 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 SFT2D1Q8WV19 159 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 C2orf50Q96LR7 162 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 OBSCN-AS1Q96MR7 158 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 CYSLTR1Q9Y271 337 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 ZFP30Q9Y2G7 519 aa0.85□□□□□ -2.27
LRCH3-211ENST00000466054 ROBO3Q96MS0 1386 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 SBF1O95248 1867 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 DENND4CQ5VZ89 1909 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 NCOA1Q15788 1441 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.84□□□□□ -2.27
LRCH3-211ENST00000466054 TRAV12-1A0A0B4J245 112 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 FAM236DA0A1B0GTK5 79 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 SULT1B1O43704 296 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 LYZL6O75951 148 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 RPP14O95059 124 aaKnown RBP0.84□□□□□ -2.27
LRCH3-211ENST00000466054 CNIH1O95406 144 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 FAM236CP0DP71 79 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 RGS21Q2M5E4 152 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 OR8J2Q8NGG1 315 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 OR13D1Q8NGV5 346 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 CT55Q8WUE5 264 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 GPR146Q96CH1 333 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 EPDR1Q9UM22 224 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 SLC35A3Q9Y2D2 325 aa0.84□□□□□ -2.27
LRCH3-211ENST00000466054 HECW1Q76N89 1606 aa0.84□□□□□ -2.28
LRCH3-211ENST00000466054 PLB1Q6P1J6 1458 aa0.84□□□□□ -2.28
LRCH3-211ENST00000466054 ZNF106Q9H2Y7 1883 aaKnown RBP0.84□□□□□ -2.28
LRCH3-211ENST00000466054 C7orf71A4D174 169 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms