RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 GNG7O60262 68 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 SCGB1D2O95969 90 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 IFNA21P01568 189 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 SLC25A6P12236 298 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 NPY1RP25929 384 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 INSL3P51460 131 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 FAM106AQ4KMX7 169 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 DEFB121Q5J5C9 76 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 DUSP18Q8NEJ0 188 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 ZNF436Q9C0F3 470 aaPredicted RBP8.85□□□□□ -0.99
CUX1-207ENST00000465461 GSKIPQ9P0R6 139 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 PAIP2BQ9ULR5 123 aaKnown RBP8.85□□□□□ -0.99
CUX1-207ENST00000465461 ZNF256Q9Y2P7 627 aaPredicted RBP8.85□□□□□ -0.99
CUX1-207ENST00000465461 PIGBOS1A0A0B4J2F0 54 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 TMEM213A2RRL7 107 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 FAM25EA8MYX2 175 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 NUPL2O15504 423 aaKnown RBP8.84□□□□□ -0.99
CUX1-207ENST00000465461 TMEM50AO95807 157 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 FOLR2P14207 255 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 CBLN1P23435 193 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 POLR2GP62487 172 aaKnown RBP eCLIP8.84□□□□□ -0.99
CUX1-207ENST00000465461 IAH1Q2TAA2 248 aaPredicted RBP8.84□□□□□ -0.99
CUX1-207ENST00000465461 REC114Q7Z4M0 266 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 C12orf45Q8N5I9 185 aaPredicted RBP8.84□□□□□ -0.99
CUX1-207ENST00000465461 OR4D5Q8NGN0 318 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 TXN2Q99757 166 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 C20orf24Q9BUV8 137 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 MEGF8Q7Z7M0 2845 aa8.84□□□□□ -0.99
CUX1-207ENST00000465461 C15orf62A8K5M9 175 aa8.83□□□□□ -1
CUX1-207ENST00000465461 H3BP45 60 aa8.83□□□□□ -1
CUX1-207ENST00000465461 CORTO00230 105 aa8.83□□□□□ -1
CUX1-207ENST00000465461 SYNGR2O43760 224 aa8.83□□□□□ -1
CUX1-207ENST00000465461 YIF1AO95070 293 aa8.83□□□□□ -1
CUX1-207ENST00000465461 GP9P14770 177 aa8.83□□□□□ -1
CUX1-207ENST00000465461 FCGR2BP31994 310 aaPredicted RBP8.83□□□□□ -1
CUX1-207ENST00000465461 ID3Q02535 119 aa8.83□□□□□ -1
CUX1-207ENST00000465461 CD300EQ496F6 205 aaPredicted RBP8.83□□□□□ -1
CUX1-207ENST00000465461 PRSS54Q6PEW0 395 aa8.83□□□□□ -1
CUX1-207ENST00000465461 SPSB3Q6PJ21 355 aa8.83□□□□□ -1
CUX1-207ENST00000465461 ZBTB8BQ8NAP8 495 aaPredicted RBP8.83□□□□□ -1
CUX1-207ENST00000465461 DYNLRB2Q8TF09 96 aa8.83□□□□□ -1
CUX1-207ENST00000465461 CACFD1Q9UGQ2 172 aa8.83□□□□□ -1
CUX1-207ENST00000465461 U3KQ87 197 aa8.83□□□□□ -1
CUX1-207ENST00000465461 IGHV3-49A0A0A0MS15 119 aa8.82□□□□□ -1
CUX1-207ENST00000465461 C5orf51A6NDU8 294 aa8.82□□□□□ -1
CUX1-207ENST00000465461 FAM90A26D6RGX4 464 aa8.82□□□□□ -1
CUX1-207ENST00000465461 INMT-MINDY4F8WBC2 141 aa8.82□□□□□ -1
CUX1-207ENST00000465461 NDUFA4O00483 81 aa8.82□□□□□ -1
CUX1-207ENST00000465461 SSSCA1O60232 199 aa8.82□□□□□ -1
CUX1-207ENST00000465461 CLN5O75503 358 aa8.82□□□□□ -1
CUX1-207ENST00000465461 MED6O75586 246 aa8.82□□□□□ -1
CUX1-207ENST00000465461 IFNA4P05014 189 aa8.82□□□□□ -1
CUX1-207ENST00000465461 IL5P05113 134 aa8.82□□□□□ -1
CUX1-207ENST00000465461 NKX2-1P43699 371 aaPredicted RBP8.82□□□□□ -1
CUX1-207ENST00000465461 NPBWR1P48145 328 aa8.82□□□□□ -1
CUX1-207ENST00000465461 RND2P52198 227 aa8.82□□□□□ -1
CUX1-207ENST00000465461 DEFA1P59665 94 aa8.82□□□□□ -1
CUX1-207ENST00000465461 DEFA3P59666 94 aa8.82□□□□□ -1
CUX1-207ENST00000465461 DEFB114Q30KQ6 69 aa8.82□□□□□ -1
CUX1-207ENST00000465461 TIGITQ495A1 244 aa8.82□□□□□ -1
CUX1-207ENST00000465461 SPANXN5Q5MJ07 72 aa8.82□□□□□ -1
CUX1-207ENST00000465461 OR4X1Q8NH49 305 aa8.82□□□□□ -1
CUX1-207ENST00000465461 RNASEH2CQ8TDP1 164 aaKnown RBP8.82□□□□□ -1
CUX1-207ENST00000465461 TMEM190Q8WZ59 177 aa8.82□□□□□ -1
CUX1-207ENST00000465461 ACY3Q96HD9 319 aa8.82□□□□□ -1
CUX1-207ENST00000465461 ATP6V0BQ99437 205 aa8.82□□□□□ -1
CUX1-207ENST00000465461 MLXQ9UH92 298 aa8.82□□□□□ -1
CUX1-207ENST00000465461 IGHV3OR16-13A0A075B7E8 117 aa8.81□□□□□ -1
CUX1-207ENST00000465461 IGHV3-74A0A0B4J1X5 117 aa8.81□□□□□ -1
CUX1-207ENST00000465461 RPS10-NUDT3A0A1W2PQS6 291 aa8.81□□□□□ -1
CUX1-207ENST00000465461 A8MWP6 167 aa8.81□□□□□ -1
CUX1-207ENST00000465461 SIX6O95475 246 aa8.81□□□□□ -1
CUX1-207ENST00000465461 CD69Q07108 199 aa8.81□□□□□ -1
CUX1-207ENST00000465461 BTNL8Q6UX41 500 aa8.81□□□□□ -1
CUX1-207ENST00000465461 TOMM20LQ6UXN7 152 aa8.81□□□□□ -1
CUX1-207ENST00000465461 SLC16A13Q7RTY0 426 aa8.81□□□□□ -1
CUX1-207ENST00000465461 NPIPB3Q92617 1050 aa8.81□□□□□ -1
CUX1-207ENST00000465461 WDR89Q96FK6 387 aaPredicted RBP8.81□□□□□ -1
CUX1-207ENST00000465461 PALMDQ9NP74 551 aa8.81□□□□□ -1
CUX1-207ENST00000465461 GAR1Q9NY12 217 aaKnown RBP8.81□□□□□ -1
CUX1-207ENST00000465461 SIGLEC8Q9NYZ4 499 aa8.81□□□□□ -1
CUX1-207ENST00000465461 PSENENQ9NZ42 101 aa8.81□□□□□ -1
CUX1-207ENST00000465461 UFC1Q9Y3C8 167 aa8.81□□□□□ -1
CUX1-207ENST00000465461 PUS1Q9Y606 427 aaKnown RBP eCLIP8.81□□□□□ -1
CUX1-207ENST00000465461 CCNKO75909 580 aa8.8□□□□□ -1
CUX1-207ENST00000465461 SCAF4O95104 1147 aaKnown RBP8.8□□□□□ -1
CUX1-207ENST00000465461 MBPP02686 304 aaPredicted RBP8.8□□□□□ -1
CUX1-207ENST00000465461 C8orf88P0DMB2 117 aa8.8□□□□□ -1
CUX1-207ENST00000465461 PAX9P55771 341 aa8.8□□□□□ -1
CUX1-207ENST00000465461 RELQ04864 619 aaPredicted RBP8.8□□□□□ -1
CUX1-207ENST00000465461 NOXA1Q86UR1 476 aa8.8□□□□□ -1
CUX1-207ENST00000465461 MARVELD1Q9BSK0 173 aa8.8□□□□□ -1
CUX1-207ENST00000465461 ZMAT5Q9UDW3 170 aaKnown RBP8.8□□□□□ -1
CUX1-207ENST00000465461 RCL1Q9Y2P8 373 aaKnown RBP8.8□□□□□ -1
CUX1-207ENST00000465461 LSM5Q9Y4Y9 91 aaKnown RBP8.8□□□□□ -1
CUX1-207ENST00000465461 LSM4Q9Y4Z0 139 aaKnown RBP8.8□□□□□ -1
CUX1-207ENST00000465461 IGHV3-66A0A0C4DH42 116 aa8.79□□□□□ -1
CUX1-207ENST00000465461 ZNF785A8K8V0 405 aa8.79□□□□□ -1
CUX1-207ENST00000465461 GOSR2O14653 212 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms