RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MAGT1Q9H0U3 335 aa13□□□□□ -0.33
VPS52-215ENST00000464425 MBPP02686 304 aaPredicted RBP12.99□□□□□ -0.33
VPS52-215ENST00000464425 GPR183P32249 361 aa12.99□□□□□ -0.33
VPS52-215ENST00000464425 POLR2GP62487 172 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS52-215ENST00000464425 VN1R17PQ8TDU5 208 aa12.99□□□□□ -0.33
VPS52-215ENST00000464425 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
VPS52-215ENST00000464425 WRBO00258 174 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 IFNA10P01566 189 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 CSN3P07498 182 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 H2BFSP57053 126 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 TAS2R30P59541 319 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
VPS52-215ENST00000464425 MISP3Q96FF7 219 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 SMIM8Q96KF7 97 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 RAB40CQ96S21 281 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 ATP6V0BQ99437 205 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 MED28Q9H204 178 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 MGAT4CQ9UBM8 478 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 SORL1Q92673 2214 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 TGP01266 2768 aa12.98□□□□□ -0.33
VPS52-215ENST00000464425 ZNF320A2RRD8 509 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 I3L2K1 104 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 K7EIM0 57 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 SIX6O95475 246 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 SCGB1D2O95969 90 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 IAPPP10997 89 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 NPY1RP25929 384 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 RNASEH2CQ8TDP1 164 aaKnown RBP12.97□□□□□ -0.33
VPS52-215ENST00000464425 SCARB1Q8WTV0 552 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 TMEM170AQ8WVE7 144 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 PEMTQ9UBM1 199 aa12.97□□□□□ -0.33
VPS52-215ENST00000464425 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
VPS52-215ENST00000464425 OR2T8A6NH00 312 aa12.96□□□□□ -0.33
VPS52-215ENST00000464425 K7EPK0 472 aa12.96□□□□□ -0.33
VPS52-215ENST00000464425 C11orf87Q6NUJ2 197 aa12.96□□□□□ -0.33
VPS52-215ENST00000464425 GPHB5Q86YW7 130 aa12.96□□□□□ -0.33
VPS52-215ENST00000464425 UBAC2Q8NBM4 344 aa12.96□□□□□ -0.33
VPS52-215ENST00000464425 C21orf62Q9NYP8 219 aa12.96□□□□□ -0.33
VPS52-215ENST00000464425 RCL1Q9Y2P8 373 aaKnown RBP12.96□□□□□ -0.33
VPS52-215ENST00000464425 SSSCA1O60232 199 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 MT-CO2P00403 227 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 IGLV1-51P01701 117 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 IGHV3-48P01763 117 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 CXCL3P19876 107 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 EDN2P20800 178 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 FCGR2BP31994 310 aaPredicted RBP12.95□□□□□ -0.34
VPS52-215ENST00000464425 PAX9P55771 341 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 RRAS2P62070 204 aaPredicted RBP12.95□□□□□ -0.34
VPS52-215ENST00000464425 RAB11AP62491 216 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 FAM106AQ4KMX7 169 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 Q56UQ5 140 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 ASB13Q8WXK3 278 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 PINX1Q96BK5 328 aaKnown RBP12.95□□□□□ -0.34
VPS52-215ENST00000464425 TXN2Q99757 166 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 PSENENQ9NZ42 101 aa12.95□□□□□ -0.34
VPS52-215ENST00000464425 C15orf62A8K5M9 175 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 TGOLN2O43493 480 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 TSC22D2O75157 780 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 TMEM50AO95807 157 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 GP9P14770 177 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 RAB32Q13637 225 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 FCN2Q15485 313 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 ETFRF1Q6IPR1 90 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 ADAMTSL5Q6ZMM2 481 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 OR11H7Q8NGC8 314 aa12.94□□□□□ -0.34
VPS52-215ENST00000464425 GAR1Q9NY12 217 aaKnown RBP12.94□□□□□ -0.34
VPS52-215ENST00000464425 STRAPQ9Y3F4 350 aaKnown RBP12.94□□□□□ -0.34
VPS52-215ENST00000464425 LSM5Q9Y4Y9 91 aaKnown RBP12.94□□□□□ -0.34
VPS52-215ENST00000464425 RPS10-NUDT3A0A1W2PQS6 291 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 C2orf70A6NJV1 201 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 F8W735 103 aaPredicted RBP12.93□□□□□ -0.34
VPS52-215ENST00000464425 LGALS9O00182 355 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 IFNA4P05014 189 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 PVALBP20472 110 aaPredicted RBP12.93□□□□□ -0.34
VPS52-215ENST00000464425 OPRK1P41145 380 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 MFAP4P55083 255 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 SPANXN5Q5MJ07 72 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 UNQ9165/PRO28630Q6UXU0 137 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 Q6ZNX1 250 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 BSCL2Q96G97 398 aaPredicted RBP12.93□□□□□ -0.34
VPS52-215ENST00000464425 CHRDL1Q9BU40 450 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 C11orf1Q9H5F2 150 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 SIGLEC8Q9NYZ4 499 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 LSM4Q9Y4Z0 139 aaKnown RBP12.93□□□□□ -0.34
VPS52-215ENST00000464425 SELENOKQ9Y6D0 94 aa12.93□□□□□ -0.34
VPS52-215ENST00000464425 L7N2F9 121 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 DEDDO75618 318 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 RLN2P04090 185 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 SLC25A4P12235 298 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 FOLR2P14207 255 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 GPX4P36969 197 aaPredicted RBP12.92□□□□□ -0.34
VPS52-215ENST00000464425 S100A10P60903 97 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 VAMP2P63027 116 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 TM4SF20Q53R12 229 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 TMEM14EPQ6UXP3 125 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 PPP1R1CQ8WVI7 109 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 CACNG8Q8WXS5 425 aa12.92□□□□□ -0.34
VPS52-215ENST00000464425 ZNF436Q9C0F3 470 aaPredicted RBP12.92□□□□□ -0.34
VPS52-215ENST00000464425 FNDC4Q9H6D8 234 aaPredicted RBP12.92□□□□□ -0.34
VPS52-215ENST00000464425 NPBWR1P48145 328 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms