RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 TSPAN32Q96QS1 320 aa0.84□□□□□ -2.27
PTPN12-210ENST00000464313 ERGIC3Q9Y282 383 aa0.84□□□□□ -2.27
PTPN12-210ENST00000464313 A0A087WX48 190 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 TRAV26-2A0A0B4J265 109 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 IGKV1-9A0A0C4DH69 117 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 FAM236DA0A1B0GTK5 79 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 CLDN24A6NM45 220 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 IFNA10P01566 189 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 FAM236CP0DP71 79 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 DEFB115Q30KQ5 88 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 RNASE10Q5GAN6 216 aaKnown RBP0.83□□□□□ -2.28
PTPN12-210ENST00000464313 PHF13Q86YI8 300 aaPredicted RBP0.83□□□□□ -2.28
PTPN12-210ENST00000464313 CLDN22Q8N7P3 220 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 ARL5BQ96KC2 179 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 CCDC42Q96M95 316 aa0.83□□□□□ -2.28
PTPN12-210ENST00000464313 TNRC6BQ9UPQ9 1833 aaKnown RBP0.82□□□□□ -2.28
PTPN12-210ENST00000464313 OR1I1O60431 355 aa0.82□□□□□ -2.28
PTPN12-210ENST00000464313 MGST1P10620 155 aaKnown RBP0.82□□□□□ -2.28
PTPN12-210ENST00000464313 SSR2P43308 183 aa0.82□□□□□ -2.28
PTPN12-210ENST00000464313 ITGB3BPQ13352 177 aaPredicted RBP0.82□□□□□ -2.28
PTPN12-210ENST00000464313 SPANXN5Q5MJ07 72 aa0.82□□□□□ -2.28
PTPN12-210ENST00000464313 PTRHD1Q6GMV3 140 aaKnown RBP0.82□□□□□ -2.28
PTPN12-210ENST00000464313 HIST3H2BBQ8N257 126 aa0.82□□□□□ -2.28
PTPN12-210ENST00000464313 ZFP30Q9Y2G7 519 aa0.82□□□□□ -2.28
PTPN12-210ENST00000464313 EML6Q6ZMW3 1958 aa0.82□□□□□ -2.28
PTPN12-210ENST00000464313 NUP155O75694 1391 aa0.82□□□□□ -2.28
PTPN12-210ENST00000464313 LOC110117498A0A087WWA1 95 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 TRAV3A0A0B4J244 114 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 C19orf84I3L1E1 186 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 OR2J2O76002 312 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 CNIH1O95406 144 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 TTRP02766 147 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 SERPINA6P08185 405 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 COX6A1P12074 109 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 MIFP14174 115 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 PDE6HQ13956 83 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 KLK9Q9UKQ9 250 aa0.81□□□□□ -2.28
PTPN12-210ENST00000464313 NOSIPQ9Y314 301 aaKnown RBP0.81□□□□□ -2.28
PTPN12-210ENST00000464313 A0A087WUJ7 227 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 PIRO00625 290 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 UBL3O95164 117 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 TCL1BO95988 128 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 RPS17P08708 135 aaKnown RBP0.8□□□□□ -2.28
PTPN12-210ENST00000464313 SMIM10L2AP0DMW4 78 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 SMIM10L2BP0DMW5 78 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 RAB4BP61018 213 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 CNBPP62633 177 aaKnown RBP0.8□□□□□ -2.28
PTPN12-210ENST00000464313 TRAPPC5Q8IUR0 188 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 MRPL57Q9BQC6 102 aaKnown RBP0.8□□□□□ -2.28
PTPN12-210ENST00000464313 OSTCQ9NRP0 149 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 ROBO3Q96MS0 1386 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 RIC1Q4ADV7 1423 aa0.8□□□□□ -2.28
PTPN12-210ENST00000464313 TRBV6-8A0A0A6YYG3 113 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 SMIM23A6NLE4 172 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 SULT1B1O43704 296 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 HYPMO75409 117 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 AESQ08117 197 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 LINC01554Q52M75 96 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 OR8J2Q8NGG1 315 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 OR13D1Q8NGV5 346 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 C20orf27Q9GZN8 174 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 RNASE7Q9H1E1 156 aaKnown RBP0.79□□□□□ -2.28
PTPN12-210ENST00000464313 ACER3Q9NUN7 267 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 TAS2R4Q9NYW5 299 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 CYSLTR1Q9Y271 337 aa0.79□□□□□ -2.28
PTPN12-210ENST00000464313 ZNF106Q9H2Y7 1883 aaKnown RBP0.79□□□□□ -2.28
PTPN12-210ENST00000464313 FBN2P35556 2912 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 KPNA3O00505 521 aaPredicted RBP0.78□□□□□ -2.28
PTPN12-210ENST00000464313 LYZL6O75951 148 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 BAALC-AS2P0C853 105 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 S100A4P26447 101 aaKnown RBP0.78□□□□□ -2.28
PTPN12-210ENST00000464313 DEFA3P59666 94 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 DEFB113Q30KQ7 82 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 KRT222Q8N1A0 295 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 Q8N814 137 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 WFDC5Q8TCV5 224 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 ZNF418Q8TF45 676 aaPredicted RBP0.78□□□□□ -2.28
PTPN12-210ENST00000464313 SFT2D1Q8WV19 159 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 GPR146Q96CH1 333 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 DCSTAMPQ9H295 470 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 MIXL1Q9H2W2 232 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 C14orf105Q9NVL8 296 aa0.78□□□□□ -2.28
PTPN12-210ENST00000464313 CEP192Q8TEP8 1941 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 SMIM9A6NGZ8 99 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 RBP1P09455 135 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 OMPP47874 163 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 RANP62826 216 aaKnown RBP0.77□□□□□ -2.29
PTPN12-210ENST00000464313 RHOGP84095 191 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 TRAPPC6BQ86SZ2 158 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 CCDC90BQ9GZT6 254 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 PARVGQ9HBI0 331 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.77□□□□□ -2.29
PTPN12-210ENST00000464313 UQCC1Q9NVA1 299 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 PRELID3BQ9Y3B1 194 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 ECM29Q5VYK3 1845 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 NOTCH1P46531 2555 aa0.77□□□□□ -2.29
PTPN12-210ENST00000464313 ZFYVE9O95405 1425 aa0.76□□□□□ -2.29
PTPN12-210ENST00000464313 hCG_1818297A0A087WSY0 165 aa0.76□□□□□ -2.29
PTPN12-210ENST00000464313 TRAV12-1A0A0B4J245 112 aa0.76□□□□□ -2.29
PTPN12-210ENST00000464313 hADV38S2A0JD32 116 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms