RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ANKRD55Q3KP44 614 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 TMEM128Q5BJH2 165 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 DUSP18Q8NEJ0 188 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 HEYLQ9NQ87 328 aaPredicted RBP9.7□□□□□ -0.86
XRN1-203ENST00000463916 SHPKQ9UHJ6 478 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 TMEM50AO95807 157 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 TOMM20LQ6UXN7 152 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 RBPMS2Q6ZRY4 209 aaKnown RBP9.7□□□□□ -0.86
XRN1-203ENST00000463916 LGI3Q8N145 548 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 OR52B4Q8NGK2 314 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 DEDD2Q8WXF8 326 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 SLC25A21Q9BQT8 299 aaPredicted RBP9.7□□□□□ -0.86
XRN1-203ENST00000463916 ZMAT4Q9H898 229 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 SMPXQ9UHP9 88 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 IGHV3OR16-13A0A075B7E8 117 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 IGHV3-74A0A0B4J1X5 117 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 LINC00854A0A1B0GVQ3 168 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 CEBPZOSA8MTT3 80 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 OPRK1P41145 380 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 HTR2BP41595 481 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 NPBWR1P48145 328 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 PPP1R1AQ13522 171 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 CSMD3Q7Z407 3707 aa9.69□□□□□ -0.86
XRN1-203ENST00000463916 A0A1B0GU03 582 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 CORTO00230 105 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 CHEK1O14757 476 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 ANXA3P12429 323 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 VAMP1P23763 118 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 TNFRSF9Q07011 255 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 SMCO1Q147U7 214 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 SLC16A13Q7RTY0 426 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 CITED4Q96RK1 184 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 RNF2Q99496 336 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 RHPN1-AS1Q9BWJ2 59 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 SRD5A3Q9H8P0 318 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 HSPB7Q9UBY9 170 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 IGHV7-4-1A0A0J9YVY3 117 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 TSPAN4O14817 238 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 APOHP02749 345 aaPredicted RBP9.68□□□□□ -0.86
XRN1-203ENST00000463916 C2orf83Q53S99 150 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 LILRB2Q8N423 598 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 TMEM116Q8NCL8 245 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 SLC24A4Q8NFF2 622 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 OR4X1Q8NH49 305 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 ZFAND3Q9H8U3 227 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 NDUFA13Q9P0J0 144 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 FLVCR2Q9UPI3 526 aa9.68□□□□□ -0.86
XRN1-203ENST00000463916 PUS1Q9Y606 427 aaKnown RBP eCLIP9.68□□□□□ -0.86
XRN1-203ENST00000463916 TRAV14DV4A0A0A6YYC5 116 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 CLN5O75503 358 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 BTCP35070 178 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 SRPXP78539 464 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 RBKSQ9H477 322 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 RETNQ9HD89 108 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 PITX3O75364 302 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 SFT2D2O95562 160 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 IGKV1-17P01599 117 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 RBMS2Q15434 407 aaKnown RBP9.67□□□□□ -0.86
XRN1-203ENST00000463916 TRIQKQ629K1 86 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 PRSS54Q6PEW0 395 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 LRTM2Q8N967 370 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 SPAG8Q99932 426 aaPredicted RBP9.67□□□□□ -0.86
XRN1-203ENST00000463916 UBQLN2Q9UHD9 624 aa9.67□□□□□ -0.86
XRN1-203ENST00000463916 IL7P13232 177 aa9.66□□□□□ -0.86
XRN1-203ENST00000463916 ZNF600Q6ZNG1 722 aa9.66□□□□□ -0.86
XRN1-203ENST00000463916 DTD1Q8TEA8 209 aa9.66□□□□□ -0.86
XRN1-203ENST00000463916 HIPK2Q9H2X6 1198 aa9.66□□□□□ -0.86
XRN1-203ENST00000463916 IGHV3-66A0A0C4DH42 116 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 NDUFB6O95139 128 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 NPY1RP25929 384 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 INPP1P49441 399 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 ODF3L2Q3SX64 289 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 TIGITQ495A1 244 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 FAM90A2PQ658T7 463 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 RNASEH2CQ8TDP1 164 aaKnown RBP9.65□□□□□ -0.86
XRN1-203ENST00000463916 ST8SIA2Q92186 375 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 SPATA25Q9BR10 227 aa9.65□□□□□ -0.86
XRN1-203ENST00000463916 IGKV3-7A0A075B6H7 116 aa9.65□□□□□ -0.87
XRN1-203ENST00000463916 IFNA10P01566 189 aa9.65□□□□□ -0.87
XRN1-203ENST00000463916 RND2P52198 227 aa9.65□□□□□ -0.87
XRN1-203ENST00000463916 OR1S1Q8NH92 325 aa9.65□□□□□ -0.87
XRN1-203ENST00000463916 FAM110AQ9BQ89 295 aa9.65□□□□□ -0.87
XRN1-203ENST00000463916 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.87
XRN1-203ENST00000463916 DUXBA0A1W2PPF3 345 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 C9orf170A2RU37 121 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 NAP1L6A6NFF2 107 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 PLA2G10O15496 165 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 HOXB5P09067 269 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 IGLC1P0CG04 106 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 VSIRQ9H7M9 311 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 EDA2RQ9HAV5 297 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 U3KQ87 197 aa9.64□□□□□ -0.87
XRN1-203ENST00000463916 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
XRN1-203ENST00000463916 TFPI2P48307 235 aa9.63□□□□□ -0.87
XRN1-203ENST00000463916 GBGT1Q8N5D6 347 aa9.63□□□□□ -0.87
XRN1-203ENST00000463916 NPIPB3Q92617 1050 aa9.63□□□□□ -0.87
XRN1-203ENST00000463916 GINS3Q9BRX5 216 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms