RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 BTF3L4Q96K17 158 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 SLC35E1Q96K37 410 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 HIST1H2BNQ99877 126 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 HIST1H2BMQ99879 126 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 PCGF1Q9BSM1 259 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 C19orf24Q9BVV8 132 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 SRD5A3Q9H8P0 318 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 PATZ1Q9HBE1 687 aaKnown RBP7.98□□□□□ -1.13
PTPRD-207ENST00000463477 URGCP-MRPS24S4R325 110 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 WNK2Q9Y3S1 2297 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 TRAV20A0A0B4J274 112 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 TEX50A0A1B0GTY4 177 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 H0YJW9 148 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 H7BYZ3 331 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 PPP1R2P9O14990 202 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 FCN3O75636 299 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 MT-CO2P00403 227 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 S100PP25815 95 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 SRP14P37108 136 aaKnown RBP7.98□□□□□ -1.13
PTPRD-207ENST00000463477 DLX6P56179 175 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 MIC13Q5XKP0 118 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 C16orf82Q7Z2V1 217 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 VSTM2AQ8TAG5 236 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 OR5B12Q96R08 314 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 IMMP2LQ96T52 175 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 HIF1ANQ9NWT6 349 aa7.98□□□□□ -1.13
PTPRD-207ENST00000463477 POLR3KQ9Y2Y1 108 aaPredicted RBP7.98□□□□□ -1.13
PTPRD-207ENST00000463477 TRBV23-1A0A0A0MS06 115 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 PPIAL4CA0A0B4J2A2 164 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 SRRM4A7MD48 611 aaKnown RBP7.97□□□□□ -1.13
PTPRD-207ENST00000463477 GGCTO75223 188 aaKnown RBP7.97□□□□□ -1.13
PTPRD-207ENST00000463477 TRGC2P03986 189 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 IGKV1-16P04430 117 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 SAA1P0DJI8 122 aaPredicted RBP7.97□□□□□ -1.13
PTPRD-207ENST00000463477 ARL14EPLP0DKL9 152 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 AREGP15514 252 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 NPPCP23582 126 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 GPX4P36969 197 aaPredicted RBP7.97□□□□□ -1.13
PTPRD-207ENST00000463477 GCSAMLQ5JQS6 135 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 STPG3Q8N7X2 389 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 TMEM167AQ8TBQ9 72 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 CACNG8Q8WXS5 425 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 ST6GALNAC6Q969X2 333 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 C11orf52Q96A22 123 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 MIOXQ9UGB7 285 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 SLC45A2Q9UMX9 530 aa7.97□□□□□ -1.13
PTPRD-207ENST00000463477 A0A1W2PN81 502 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 FOXH1O75593 365 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 TYMSP04818 313 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 LINC00869P0C866 280 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 RNASE2P10153 161 aaKnown RBP7.96□□□□□ -1.13
PTPRD-207ENST00000463477 GCHFRP30047 84 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 CHRNA7P36544 502 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 GALR1P47211 349 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 GNB1P62873 340 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 FAM120AOSQ5T036 256 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 OR4C13Q8NGP0 309 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 TNFRSF14Q92956 283 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 HARBI1Q96MB7 349 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 NABP2Q9BQ15 211 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 MRPL20Q9BYC9 149 aaKnown RBP7.96□□□□□ -1.13
PTPRD-207ENST00000463477 NDUFA4L2Q9NRX3 87 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 LY96Q9Y6Y9 160 aa7.96□□□□□ -1.13
PTPRD-207ENST00000463477 DEFA4P12838 97 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 CCL3L1P16619 93 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 HNF1AP20823 631 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 GATA3P23771 443 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 ZFP36P26651 326 aaKnown RBP7.95□□□□□ -1.14
PTPRD-207ENST00000463477 MC5RP33032 325 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 FAM3BP58499 235 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-207ENST00000463477 RPL8P62917 257 aaKnown RBP7.95□□□□□ -1.14
PTPRD-207ENST00000463477 LCN2P80188 198 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 CD69Q07108 199 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 DNLZQ5SXM8 178 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 LINC01551Q86U37 167 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 OR9G1Q8NH87 305 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 ABHD5Q8WTS1 349 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 FRZBQ92765 325 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 FLYWCH2Q96CP2 140 aaKnown RBP7.95□□□□□ -1.14
PTPRD-207ENST00000463477 LPAR2Q9HBW0 351 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 CTSZQ9UBR2 303 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 MXRA5Q9NR99 2828 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 C9JCJ5 164 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 DVL1O14640 695 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 RBP4P02753 201 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 TRGC1P0CF51 173 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 IL3RAP26951 378 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 ATP5G3P48201 142 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 NDUFA6P56556 154 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 ERHP84090 104 aaKnown RBP7.95□□□□□ -1.14
PTPRD-207ENST00000463477 HLA-DRB5Q30154 266 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
PTPRD-207ENST00000463477 CST9LP1Q5W188 147 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 LYPD2Q6UXB3 125 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 SSMEM1Q8WWF3 244 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 RNF2Q99496 336 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 COMMD5Q9GZQ3 224 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 TMEM167BQ9NRX6 74 aa7.95□□□□□ -1.14
PTPRD-207ENST00000463477 GAR1Q9NY12 217 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms