RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 FMN1Q68DA7 1419 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.87□□□□□ -2.11
GPNMB-205ENST00000463011 WFDC5Q8TCV5 224 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 C11orf40Q8WZ69 217 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 TMEM106AQ96A25 262 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 LYSMD1Q96S90 227 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 PRO2289Q9P1D8 64 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 KIF24Q5T7B8 1368 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 ATG2BQ96BY7 2078 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 TRGV4A0A0C4DH28 118 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 A0A0G2JQZ4 141 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 GNG14A0A1W2PPG7 69 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 ARRDC5A6NEK1 342 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 AIPO00170 330 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 PGLYRP1O75594 196 aaPredicted RBP1.86□□□□□ -2.11
GPNMB-205ENST00000463011 IFI30P13284 250 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 AQP4P55087 323 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 KRTAP10-10P60014 251 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 SLC38A11Q08AI6 406 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 KHDC3LQ587J8 217 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 TMEM86AQ8N2M4 240 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 OR5A1Q8NGJ0 315 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 OR8D4Q8NGM9 314 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 SERPINI1Q99574 410 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 DOHHQ9BU89 302 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 IMUPQ9GZP8 106 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 MIXL1Q9H2W2 232 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 RNF122Q9H9V4 155 aa1.86□□□□□ -2.11
GPNMB-205ENST00000463011 SCAF11Q99590 1463 aaKnown RBP1.86□□□□□ -2.11
GPNMB-205ENST00000463011 MAST2Q6P0Q8 1798 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 A0A087X0T9 212 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 IGKV1-9A0A0C4DH69 117 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 MEIS3P1A6NDR6 274 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 OR51F1A6NGY5 319 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 CLPSP04118 112 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 SHBGP04278 402 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 CSN2P05814 226 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 CRYGAP11844 174 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 FXYD2P54710 66 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 Q6ZTI0 123 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 TAC4Q86UU9 113 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 FAM24BQ8N5W8 94 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 ZNF439Q8NDP4 499 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 OR10K1Q8NGX5 313 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 STAG3L4Q8TBR4 150 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 ADAT3Q96EY9 351 aaPredicted RBP1.85□□□□□ -2.11
GPNMB-205ENST00000463011 TMEM70Q9BUB7 260 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 TIMM21Q9BVV7 248 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 CKLFQ9UBR5 152 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 PCTPQ9UKL6 214 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 BAIAP2Q9UQB8 552 aa1.85□□□□□ -2.11
GPNMB-205ENST00000463011 COL4A4P53420 1690 aaPredicted RBP1.85□□□□□ -2.11
GPNMB-205ENST00000463011 NYNRINQ9P2P1 1898 aaKnown RBP1.84□□□□□ -2.11
GPNMB-205ENST00000463011 RIIAD1A6NNX1 92 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 TAX1BP3O14907 124 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 ORC5O43913 435 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.11
GPNMB-205ENST00000463011 SRP14P37108 136 aaKnown RBP1.84□□□□□ -2.11
GPNMB-205ENST00000463011 PSMD8P48556 350 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 EIF5AP63241 154 aaKnown RBP1.84□□□□□ -2.11
GPNMB-205ENST00000463011 TFAMQ00059 246 aaKnown RBP1.84□□□□□ -2.11
GPNMB-205ENST00000463011 NDUFA5Q16718 116 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 TPRXLQ17RH7 258 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 RRN3P1Q2M238 152 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 DPPA3Q6W0C5 159 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 WFDC11Q8NEX6 87 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 OR10J5Q8NHC4 309 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 DYDC1Q8WWB3 177 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 SLAMF6Q96DU3 332 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 HIST1H2BLQ99880 126 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 DDA1Q9BW61 102 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 TMEM133Q9H2Q1 129 aa1.84□□□□□ -2.11
GPNMB-205ENST00000463011 KIF13BQ9NQT8 1826 aa1.84□□□□□ -2.12
GPNMB-205ENST00000463011 MYO16Q9Y6X6 1858 aa1.84□□□□□ -2.12
GPNMB-205ENST00000463011 YTHDC2Q9H6S0 1430 aaKnown RBP1.83□□□□□ -2.12
GPNMB-205ENST00000463011 ZNF407Q9C0G0 2248 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 SHROOM3Q8TF72 1996 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 DUXBA0A1W2PPF3 345 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 MAP1LC3B2A6NCE7 125 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 TMEM212A6NML5 194 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 PIAS1O75925 651 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 TCL1BO95988 128 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 APOA2P02652 100 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 SCGB2B2Q4G0G5 96 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 BCL2L15Q5TBC7 163 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 DCUN1D2Q6PH85 259 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 LCN15Q6UWW0 184 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 AAED1Q7RTV5 226 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 OR4E2Q8NGC2 313 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 DCANP1Q8TF63 244 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 MALSU1Q96EH3 234 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 OR2J1Q9GZK6 312 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 MAP1LC3BQ9GZQ8 125 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 PBOV1Q9GZY1 135 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 CXCL16Q9H2A7 254 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 NDUFAF1Q9Y375 327 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 TONSLQ96HA7 1378 aa1.83□□□□□ -2.12
GPNMB-205ENST00000463011 ADGRB3O60242 1522 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 MED1Q15648 1581 aaPredicted RBP1.82□□□□□ -2.12
GPNMB-205ENST00000463011 A0A0D9SG52 128 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms