RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 BCL2L15Q5TBC7 163 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 LINC01590Q5TEZ4 76 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 TMEM91Q6ZNR0 172 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 DPPA2Q7Z7J5 298 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 OR6V1Q8N148 313 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 GRPEL2Q8TAA5 225 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 ASB13Q8WXK3 278 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 SPTSSAQ969W0 71 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 PGLYRP3Q96LB9 341 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 TSPAN32Q96QS1 320 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 ANAPC13Q9BS18 74 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 ANGPTL4Q9BY76 406 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 SLC25A31Q9H0C2 315 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 ABCG5Q9H222 651 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 FBXL15Q9H469 300 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 MED11Q9P086 117 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 SCP2D1Q9UJQ7 156 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 MCTS1Q9ULC4 181 aaKnown RBP2.24□□□□□ -2.05
VPS41-210ENST00000462429 NUBP2Q9Y5Y2 271 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 R4GMQ9 66 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 SPTBP11277 2137 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 NUP210LQ5VU65 1888 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 CHD9Q3L8U1 2897 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 ASCC3Q8N3C0 2202 aaKnown RBP2.23□□□□□ -2.05
VPS41-210ENST00000462429 KIR2DS1A0A191URI9 304 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 A0A1B0GVG6 124 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 FTCDNL1E5RQL4 147 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 INMT-MINDY4F8WBC2 141 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 SMLR1H3BR10 107 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 CDIPTO14735 213 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 SGCEO43556 437 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 GSTZ1O43708 216 aaPredicted RBP2.23□□□□□ -2.05
VPS41-210ENST00000462429 KLF7O75840 302 aaPredicted RBP2.23□□□□□ -2.05
VPS41-210ENST00000462429 CYB5AP00167 134 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 OR5AC1P0C628 307 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 COX6A1P12074 109 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 S100A2P29034 98 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 ERP29P30040 261 aaKnown RBP2.23□□□□□ -2.05
VPS41-210ENST00000462429 MPV17P39210 176 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 CBX5P45973 191 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 FOXF1Q12946 379 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 BSXQ3C1V8 233 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 DCXRQ7Z4W1 244 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 SLC22A24Q8N4F4 322 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 SLC26A10Q8NG04 563 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 OR2M3Q8NG83 312 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 OR11G2Q8NGC1 345 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 RPS4Y2Q8TD47 263 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 SMIM4Q8WVI0 70 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 PP6455Q8WZ26 134 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 CCL17Q92583 94 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 HYLS1Q96M11 299 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 FAM210AQ96ND0 272 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 SLC25A21Q9BQT8 299 aaPredicted RBP2.23□□□□□ -2.05
VPS41-210ENST00000462429 CST11Q9H112 138 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 MED28Q9H204 178 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 TMEM138Q9NPI0 162 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 GLTPQ9NZD2 209 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 OR52A1Q9UKL2 312 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 CHCHD2Q9Y6H1 151 aaPredicted RBP2.23□□□□□ -2.05
VPS41-210ENST00000462429 U3KQA8 63 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 V9GYH0 126 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 HEATR5AQ86XA9 2040 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 COL5A1P20908 1838 aaPredicted RBP2.23□□□□□ -2.05
VPS41-210ENST00000462429 CACNA1DQ01668 2161 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 PCDH15Q96QU1 1955 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
VPS41-210ENST00000462429 LAMA2P24043 3122 aaKnown RBP2.22□□□□□ -2.05
VPS41-210ENST00000462429 SDK1Q7Z5N4 2213 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 ASXL3Q9C0F0 2248 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 TRIOBPQ9H2D6 2365 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 SHANK1Q9Y566 2161 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 EML5Q05BV3 1969 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 A0A1B0GXF2 115 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 IZUMO1RA6ND01 250 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 OR6C6A6NF89 314 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 GGT3PA6NGU5 568 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 OR4C45A6NMZ5 311 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 SNRPGP15A8MWD9 76 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 DISC1C4P0D8 188 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 COX7A2P2O60397 106 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 CREBL2O60519 120 aaPredicted RBP2.22□□□□□ -2.05
VPS41-210ENST00000462429 MRPL33O75394 65 aaKnown RBP2.22□□□□□ -2.05
VPS41-210ENST00000462429 TNFSF15O95150 251 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 TCRBP04435 133 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 IFNA6P05013 189 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 SOD3P08294 240 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 AKAIN1P0CW23 69 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 CCL4P13236 92 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 CTLA4P16410 223 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 SLC6A1P30531 599 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 AGTR1P30556 359 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 ZNF93P35789 620 aaPredicted RBP2.22□□□□□ -2.05
VPS41-210ENST00000462429 LGALS7P47929 136 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 KCNJ3P48549 501 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 CAV3P56539 151 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 OR10A3P58181 314 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 RRAS2P62070 204 aaPredicted RBP2.22□□□□□ -2.05
VPS41-210ENST00000462429 H3F3AP84243 136 aa2.22□□□□□ -2.05
VPS41-210ENST00000462429 PLGLB1Q02325 96 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms