RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 C2orf83Q53S99 150 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 TMEM200BQ69YZ2 307 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 OR4P4Q8NGL7 312 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 GNB1LQ9BYB4 327 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 OR51B2Q9Y5P1 312 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 EPG5Q9HCE0 2579 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 A0A1B0GUS0 222 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 FOXH1O75593 365 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 OR5G3P0C626 314 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 TPPP2P59282 170 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 NUTF2P61970 127 aaKnown RBP10.06□□□□□ -0.8
COL4A6-204ENST00000461897 RANP62826 216 aaKnown RBP10.06□□□□□ -0.8
COL4A6-204ENST00000461897 PQLC2Q6ZP29 291 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 H1FXQ92522 213 aaKnown RBP10.06□□□□□ -0.8
COL4A6-204ENST00000461897 ZNF714Q96N38 554 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
COL4A6-204ENST00000461897 GAL3ST2Q9H3Q3 398 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 OSTCQ9NRP0 149 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 TECRQ9NZ01 308 aaKnown RBP10.06□□□□□ -0.8
COL4A6-204ENST00000461897 RPUSD1Q9UJJ7 312 aaKnown RBP10.06□□□□□ -0.8
COL4A6-204ENST00000461897 INS-IGF2F8WCM5 200 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 SCGB1D1O95968 90 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 MT-ND6P03923 174 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 CBLN1P23435 193 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 RPEL1Q2QD12 228 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 DOPEY1Q5JWR5 2465 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 TEX43Q6ZNM6 134 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 SLC25A48Q6ZT89 311 aaKnown RBP10.06□□□□□ -0.8
COL4A6-204ENST00000461897 MIR17HGQ75NE6 70 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 MMD2Q8IY49 270 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 OR1L8Q8NGR8 309 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-204ENST00000461897 ZNF503Q96F45 646 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 NABP2Q9BQ15 211 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 PLEKHA3Q9HB20 300 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 BET1LQ9NYM9 111 aa10.06□□□□□ -0.8
COL4A6-204ENST00000461897 A6NNC1 897 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 J3QR06 171 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 EREGO14944 169 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 CRISP2P16562 243 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 GNG10P50151 68 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 ZNF841Q6ZN19 808 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 ZNF843Q8N446 348 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 OR5B3Q8NH48 314 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 NEU1Q99519 415 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 C20orf144Q9BQM9 153 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 UBTD1Q9HAC8 227 aa10.05□□□□□ -0.8
COL4A6-204ENST00000461897 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
COL4A6-204ENST00000461897 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 HELTA6NFD8 242 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 SLC17A3O00476 420 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 CT45A6P0DMU7 189 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 CT45A5P0DMU8 189 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 CT45A7P0DMV0 189 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 RAB4AP20338 218 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 DLX6P56179 175 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 RPL19P84098 196 aaKnown RBP10.04□□□□□ -0.8
COL4A6-204ENST00000461897 TPTE2P1Q5T6R2 138 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 Q6ZWC4 215 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 LYG1Q8N1E2 194 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 OR1L6Q8NGR2 347 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 NEU4Q8WWR8 484 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-204ENST00000461897 SNHG12Q9BXW3 62 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 ZNF462Q96JM2 2506 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 IGKV1OR2-108A0A075B7D4 117 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 ISLRO14498 428 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 CDKN1AP38936 164 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 GNG4P50150 75 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 TAS2R45P59539 299 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 CX3CL1P78423 397 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 PSG5Q15238 335 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 USF2Q15853 346 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-204ENST00000461897 TMEM155Q4W5P6 130 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 CENPWQ5EE01 88 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 WDR73Q6P4I2 378 aa10.04□□□□□ -0.8
COL4A6-204ENST00000461897 MRPL32Q9BYC8 188 aaKnown RBP10.04□□□□□ -0.8
COL4A6-204ENST00000461897 TACC2O95359 2948 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 TEX50A0A1B0GTY4 177 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 GRIFINA4D1Z8 144 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 M0R143 59 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 SERF1AO75920 110 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 RNASE2P10153 161 aaKnown RBP10.03□□□□□ -0.8
COL4A6-204ENST00000461897 HNF1AP20823 631 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 ZNF833PQ6ZTB9 187 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 TGIF2LXQ8IUE1 241 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 CACNG8Q8WXS5 425 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 RNF2Q99496 336 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 SLC35D1Q9NTN3 355 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 MALRD1Q5VYJ5 2156 aa10.03□□□□□ -0.8
COL4A6-204ENST00000461897 PSMB11A5LHX3 300 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.8
COL4A6-204ENST00000461897 FCN1O00602 326 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 NDUFS7O75251 213 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 IGLV2-8P01709 118 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 MYOD1P15172 320 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 CRYBB3P26998 211 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 CD69Q07108 199 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 IGF2BP2-AS1Q96M15 143 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms