RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SLC24A4Q8NFF2 622 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 OR1S1Q8NH92 325 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 TM2D3Q9BRN9 247 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 HIPK2Q9H2X6 1198 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 RPS10-NUDT3A0A1W2PQS6 291 aa11.58□□□□□ -0.56
VARS-219ENST00000461328 ZNF785A8K8V0 405 aa11.58□□□□□ -0.56
VARS-219ENST00000461328 CD7P09564 240 aa11.58□□□□□ -0.56
VARS-219ENST00000461328 FCGR2BP31994 310 aaPredicted RBP11.58□□□□□ -0.56
VARS-219ENST00000461328 NMSQ5H8A3 153 aa11.58□□□□□ -0.56
VARS-219ENST00000461328 OR52B4Q8NGK2 314 aa11.58□□□□□ -0.56
VARS-219ENST00000461328 STAB2Q8WWQ8 2551 aa11.57□□□□□ -0.56
VARS-219ENST00000461328 DUXBA0A1W2PPF3 345 aa11.57□□□□□ -0.56
VARS-219ENST00000461328 C15orf62A8K5M9 175 aa11.57□□□□□ -0.56
VARS-219ENST00000461328 C8orf88P0DMB2 117 aa11.57□□□□□ -0.56
VARS-219ENST00000461328 TNFRSF9Q07011 255 aa11.57□□□□□ -0.56
VARS-219ENST00000461328 PPP1R1AQ13522 171 aa11.57□□□□□ -0.56
VARS-219ENST00000461328 ANKRD55Q3KP44 614 aa11.57□□□□□ -0.56
VARS-219ENST00000461328 TRAV25A0A0B4J276 109 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 C3orf84H3BNL1 204 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 K7EMT4 169 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 SFT2D2O95562 160 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 IFNA10P01566 189 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 IL7P13232 177 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 NPY1RP25929 384 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 HAGHQ16775 308 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 BSXQ3C1V8 233 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 LAMTOR1Q6IAA8 161 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 NOXA1Q86UR1 476 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 DTD1Q8TEA8 209 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 SPATA25Q9BR10 227 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 GINS3Q9BRX5 216 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 WFDC10AQ9H1F0 79 aa11.56□□□□□ -0.56
VARS-219ENST00000461328 IGHV3-49A0A0A0MS15 119 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 A0A1B0GU03 582 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 OR11H12B2RN74 326 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 NDUFB6O95139 128 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 C2orf83Q53S99 150 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 PVRIGQ6DKI7 326 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 ZNF600Q6ZNG1 722 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 DEFB125Q8N687 156 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 MUC7Q8TAX7 377 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 SDHCQ99643 169 aaPredicted RBP11.55□□□□□ -0.56
VARS-219ENST00000461328 C7orf50Q9BRJ6 194 aaKnown RBP11.55□□□□□ -0.56
VARS-219ENST00000461328 RBKSQ9H477 322 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
VARS-219ENST00000461328 SRD5A3Q9H8P0 318 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
VARS-219ENST00000461328 IGHV7-4-1A0A0J9YVY3 117 aa11.54□□□□□ -0.56
VARS-219ENST00000461328 CLN5O75503 358 aa11.54□□□□□ -0.56
VARS-219ENST00000461328 BMI1P35226 326 aa11.54□□□□□ -0.56
VARS-219ENST00000461328 UBE2MP61081 183 aaKnown RBP11.54□□□□□ -0.56
VARS-219ENST00000461328 ETFRF1Q6IPR1 90 aa11.54□□□□□ -0.56
VARS-219ENST00000461328 OR4X1Q8NH49 305 aa11.54□□□□□ -0.56
VARS-219ENST00000461328 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
VARS-219ENST00000461328 SPAG8Q99932 426 aaPredicted RBP11.54□□□□□ -0.56
VARS-219ENST00000461328 SMPXQ9UHP9 88 aa11.54□□□□□ -0.56
VARS-219ENST00000461328 PUS1Q9Y606 427 aaKnown RBP eCLIP11.54□□□□□ -0.56
VARS-219ENST00000461328 HUWE1Q7Z6Z7 4374 aaKnown RBP11.54□□□□□ -0.56
VARS-219ENST00000461328 IGHV3OR16-13A0A075B7E8 117 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 TRAV14DV4A0A0A6YYC5 116 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 IGHV3-74A0A0B4J1X5 117 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 TMEM50AO95807 157 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 HOXB5P09067 269 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 SLC25A4P12235 298 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 RND2P52198 227 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 MLANAQ16655 118 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 TOMM20LQ6UXN7 152 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 LRTM2Q8N967 370 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 CITED4Q96RK1 184 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 RHPN1-AS1Q9BWJ2 59 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 MRPL36Q9P0J6 103 aaKnown RBP11.53□□□□□ -0.56
VARS-219ENST00000461328 FLVCR2Q9UPI3 526 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 TMED3Q9Y3Q3 217 aa11.53□□□□□ -0.56
VARS-219ENST00000461328 TSPAN4O14817 238 aa11.52□□□□□ -0.57
VARS-219ENST00000461328 IFNA4P05014 189 aa11.52□□□□□ -0.57
VARS-219ENST00000461328 C4orf46Q504U0 113 aa11.52□□□□□ -0.57
VARS-219ENST00000461328 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.57
VARS-219ENST00000461328 COQ8AQ8NI60 647 aa11.52□□□□□ -0.57
VARS-219ENST00000461328 ACY3Q96HD9 319 aa11.52□□□□□ -0.57
VARS-219ENST00000461328 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.57
VARS-219ENST00000461328 U3KQ87 197 aa11.52□□□□□ -0.57
VARS-219ENST00000461328 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 TRAV30A0A087WSZ9 112 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 C9orf170A2RU37 121 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 RBMY1BA6NDE4 496 aaKnown RBP11.51□□□□□ -0.57
VARS-219ENST00000461328 RBMY1EA6NEQ0 496 aaKnown RBP11.51□□□□□ -0.57
VARS-219ENST00000461328 OR4C46A6NHA9 309 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 CHEK1O14757 476 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 MED6O75586 246 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 RBMY1DP0C7P1 496 aaKnown RBP11.51□□□□□ -0.57
VARS-219ENST00000461328 IAPPP10997 89 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 SLC25A6P12236 298 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 LYL1P12980 280 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 ANXA7P20073 488 aaKnown RBP11.51□□□□□ -0.57
VARS-219ENST00000461328 BTCP35070 178 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 TIGITQ495A1 244 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 GGNBP1Q5YKI7 109 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 PRSS54Q6PEW0 395 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms