RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 C15orf54Q8N8G6 183 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 OR2T6Q8NHC8 308 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 ABHD5Q8WTS1 349 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 TVP23CQ96ET8 276 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 YPEL4Q96NS1 127 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 TRGV9Q99603 122 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 NIPSNAP3BQ9BS92 247 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 MRPL32Q9BYC8 188 aaKnown RBP8.63□□□□□ -1.03
IFT88-204ENST00000461115 SDF2L1Q9HCN8 221 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 TMEM242Q9NWH2 141 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 HILPDAQ9Y5L2 63 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 DMRT1Q9Y5R6 373 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 ADARB2-AS1A8MUL3 147 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 CLN5O75503 358 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 DEFA4P12838 97 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 FOLR2P14207 255 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 LGALS4P56470 323 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 MMDQ15546 238 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 MRPL36Q9P0J6 103 aaKnown RBP8.63□□□□□ -1.03
IFT88-204ENST00000461115 IGHV4-61A0A0C4DH41 118 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 CXorf65A6NEN9 183 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 NPIPB5A8MRT5 1133 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 I3L2K1 104 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 NUPL2O15504 423 aaKnown RBP8.62□□□□□ -1.03
IFT88-204ENST00000461115 PDE6DO43924 150 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 PAGE4O60829 102 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 MT-CO2P00403 227 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 ARL14EPLP0DKL9 152 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 GCHFRP30047 84 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 FBLN7Q53RD9 439 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 TMEM88Q6PEY1 159 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 CLEC2AQ6UVW9 174 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 PQLC2Q6ZP29 291 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 C17orf50Q8WW18 174 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 TMEM37Q8WXS4 190 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 NPIPB3Q92617 1050 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 ZNF48Q96MX3 618 aaPredicted RBP8.62□□□□□ -1.03
IFT88-204ENST00000461115 SLC25A33Q9BSK2 321 aa8.62□□□□□ -1.03
IFT88-204ENST00000461115 A0A096LNT2 108 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 F6UZH7 168 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 NPFFO15130 113 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 HMGB3O15347 200 aaKnown RBP8.61□□□□□ -1.03
IFT88-204ENST00000461115 EIF3GO75821 320 aaKnown RBP eCLIP8.61□□□□□ -1.03
IFT88-204ENST00000461115 NPPCP23582 126 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 ATP5J2P56134 94 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 RNF212Q495C1 297 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 SPATA31B1PQ5VZV4 182 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 TTC9CQ8N5M4 171 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 OR4X1Q8NH49 305 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 C11orf52Q96A22 123 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 ZNF503Q96F45 646 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 FAM167A-AS1Q96KT0 104 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 PFDN5Q99471 154 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 DNAJC4Q9NNZ3 241 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 RPS10P5Q9NQ39 176 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 TMEM167BQ9NRX6 74 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 TECRQ9NZ01 308 aaKnown RBP8.61□□□□□ -1.03
IFT88-204ENST00000461115 C1RLQ9NZP8 487 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 DOK5Q9P104 306 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
IFT88-204ENST00000461115 PUS1Q9Y606 427 aaKnown RBP eCLIP8.61□□□□□ -1.03
IFT88-204ENST00000461115 FAM208BQ5VWN6 2430 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 LRRK2Q5S007 2527 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 C11orf94C9JXX5 98 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 M0R036 132 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 TSPAN4O14817 238 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 HLA-DRB1P01911 266 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 REG1AP05451 166 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 FAM106CPP0CH98 169 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 C8orf88P0DMB2 117 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 COX6B1P14854 86 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 BRS3P32247 399 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 SAA4P35542 130 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 RND2P52198 227 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 TAS2R45P59539 299 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 CX3CL1P78423 397 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 FXYD3Q14802 87 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 ASPHD1Q5U4P2 390 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 FAM78BQ5VT40 261 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 Q8N9W7 124 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 OR1L4Q8NGR5 311 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 MEGF9Q9H1U4 602 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 PRELID1Q9Y255 219 aa8.6□□□□□ -1.03
IFT88-204ENST00000461115 TMA7Q9Y2S6 64 aaKnown RBP8.6□□□□□ -1.03
IFT88-204ENST00000461115 IGLV11-55A0A075B6I3 123 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 IGHV4-30-2A0A087WSY4 118 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 A0A1W2PRE2 83 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 K7EIM0 57 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 MT-ND4LP03901 98 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 IGLC1P0CG04 106 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 SLC25A16P16260 332 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 GATA2P23769 480 aaPredicted RBP8.59□□□□□ -1.03
IFT88-204ENST00000461115 PLGLAQ15195 96 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 RUSC1-AS1Q66K80 236 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 PATE2Q6UY27 113 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 MIR17HGQ75NE6 70 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms