RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 MT-CO2P00403 227 aa13.23□□□□□ -0.29
NELFCD-201ENST00000460601 ATP5IP56385 69 aaPredicted RBP13.23□□□□□ -0.29
NELFCD-201ENST00000460601 TMEM95Q3KNT9 176 aa13.23□□□□□ -0.29
NELFCD-201ENST00000460601 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
NELFCD-201ENST00000460601 FANCD2OSQ96PS1 177 aa13.23□□□□□ -0.29
NELFCD-201ENST00000460601 SRSF8Q9BRL6 282 aaKnown RBP13.23□□□□□ -0.29
NELFCD-201ENST00000460601 PARD6GQ9BYG4 376 aaPredicted RBP13.23□□□□□ -0.29
NELFCD-201ENST00000460601 CRYGCP07315 174 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 GCSAMLQ5JQS6 135 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 ACSM6Q6P461 480 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 TTC9CQ8N5M4 171 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 NPIPB3Q92617 1050 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 GSX1Q9H4S2 264 aaPredicted RBP13.22□□□□□ -0.29
NELFCD-201ENST00000460601 VPREB3Q9UKI3 123 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 SOX15O60248 233 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 LY6G6DO95868 133 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 GATA2P23769 480 aaPredicted RBP13.22□□□□□ -0.29
NELFCD-201ENST00000460601 RND2P52198 227 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 TEPPQ6URK8 271 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 LINC00518Q8N0U6 118 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
NELFCD-201ENST00000460601 AGPAT2O15120 278 aa13.21□□□□□ -0.29
NELFCD-201ENST00000460601 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.29
NELFCD-201ENST00000460601 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
NELFCD-201ENST00000460601 Q6ZRG5 221 aa13.21□□□□□ -0.29
NELFCD-201ENST00000460601 A0A1B0GV50 99 aa13.21□□□□□ -0.3
NELFCD-201ENST00000460601 I3L2K1 104 aa13.21□□□□□ -0.3
NELFCD-201ENST00000460601 K7EIM0 57 aa13.21□□□□□ -0.3
NELFCD-201ENST00000460601 CAMLGP49069 296 aa13.21□□□□□ -0.3
NELFCD-201ENST00000460601 ZNF616Q08AN1 781 aa13.21□□□□□ -0.3
NELFCD-201ENST00000460601 FAM213BQ8TBF2 198 aa13.21□□□□□ -0.3
NELFCD-201ENST00000460601 CACNG8Q8WXS5 425 aa13.21□□□□□ -0.3
NELFCD-201ENST00000460601 PSMG3Q9BT73 122 aaPredicted RBP13.21□□□□□ -0.3
NELFCD-201ENST00000460601 PRDM13Q9H4Q3 707 aa13.21□□□□□ -0.3
NELFCD-201ENST00000460601 NF1P21359 2839 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 HIVEP2P31629 2446 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 IGLV11-55A0A075B6I3 123 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 BTBD17A6NE02 478 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 GPX4P36969 197 aaPredicted RBP13.2□□□□□ -0.3
NELFCD-201ENST00000460601 RAB2AP61019 212 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 TMEM144Q7Z5S9 345 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 SLC35E3Q7Z769 313 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 SLC35E1Q96K37 410 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 RPRMQ9NS64 109 aa13.2□□□□□ -0.3
NELFCD-201ENST00000460601 M0QZK8 103 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 OR2J3O76001 311 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 IGHV3-23P01764 117 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 IGHG2P01859 326 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 FLI1Q01543 452 aaPredicted RBP13.19□□□□□ -0.3
NELFCD-201ENST00000460601 ZNF90Q03938 601 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 AKR1C8PQ5T2L2 129 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 SSX7Q7RTT5 188 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 MARC2Q969Z3 335 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 HRH4Q9H3N8 390 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 IGKV1D-37A0A075B6S9 117 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 OR10J1P30954 320 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 AKIRIN2Q53H80 203 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 FFAR4Q5NUL3 377 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
NELFCD-201ENST00000460601 ZNF709Q8N972 641 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 CLRN3Q8NCR9 226 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 MS4A10Q96PG2 267 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 ZNF355PQ9NSJ1 428 aa13.19□□□□□ -0.3
NELFCD-201ENST00000460601 TRAV41A0A0B4J266 112 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 CYSRT1A8MQ03 144 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 FNDC10F2Z333 226 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 CORTO00230 105 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 C16orf82Q7Z2V1 217 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 STPG3Q8N7X2 389 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 BPIFCQ8NFQ6 507 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 PXMP4Q9Y6I8 212 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 HMGB3O15347 200 aaKnown RBP13.18□□□□□ -0.3
NELFCD-201ENST00000460601 NDUFB8O95169 186 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 C19orf54Q5BKX5 351 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 RPP25LQ8N5L8 163 aaKnown RBP13.18□□□□□ -0.3
NELFCD-201ENST00000460601 FAM110DQ8TAY7 271 aaPredicted RBP13.18□□□□□ -0.3
NELFCD-201ENST00000460601 TIMM9Q9Y5J7 89 aa13.18□□□□□ -0.3
NELFCD-201ENST00000460601 ZFP92A6NM28 416 aa13.17□□□□□ -0.3
NELFCD-201ENST00000460601 MPDU1O75352 247 aa13.17□□□□□ -0.3
NELFCD-201ENST00000460601 YIF1AO95070 293 aa13.17□□□□□ -0.3
NELFCD-201ENST00000460601 B2MP61769 119 aa13.17□□□□□ -0.3
NELFCD-201ENST00000460601 SERF2P84101 59 aa13.17□□□□□ -0.3
NELFCD-201ENST00000460601 TMEM116Q8NCL8 245 aa13.17□□□□□ -0.3
NELFCD-201ENST00000460601 ESM1Q9NQ30 184 aa13.17□□□□□ -0.3
NELFCD-201ENST00000460601 UMAD1C9J7I0 102 aa13.16□□□□□ -0.3
NELFCD-201ENST00000460601 C17orf112F2Z3M2 114 aa13.16□□□□□ -0.3
NELFCD-201ENST00000460601 IGF1P05019 195 aa13.16□□□□□ -0.3
NELFCD-201ENST00000460601 DNASE2O00115 360 aaPredicted RBP13.16□□□□□ -0.3
NELFCD-201ENST00000460601 ETFRF1Q6IPR1 90 aa13.16□□□□□ -0.3
NELFCD-201ENST00000460601 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
NELFCD-201ENST00000460601 SLC25A22Q9H936 323 aa13.16□□□□□ -0.3
NELFCD-201ENST00000460601 SLC45A2Q9UMX9 530 aa13.16□□□□□ -0.3
NELFCD-201ENST00000460601 HNF1AP20823 631 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 PRR20EP86478 221 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 PRR20CP86479 221 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 PRR20DP86480 221 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 PRR20BP86481 221 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms