RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ACACBO00763 2458 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 NAV3Q8IVL0 2385 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 IGHV3-21A0A0B4J1V1 117 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 COX7A1P24310 79 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 IER3P46695 156 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 BORCS7Q96B45 105 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 SMIM12Q96EX1 92 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 TANC2Q9HCD6 1990 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 C15orf65H3BRN8 121 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 NDUFB4O95168 129 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 THBS3P49746 956 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 OR4P4Q8NGL7 312 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 MEGF9Q9H1U4 602 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 MS4A5Q9H3V2 200 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 ARHGAP32A7KAX9 2087 aa12.66□□□□□ -0.38
LMNB1-203ENST00000460265 GUSBP1Q15486 140 aa12.65□□□□□ -0.38
LMNB1-203ENST00000460265 FAM216AQ8WUB2 273 aa12.65□□□□□ -0.38
LMNB1-203ENST00000460265 IDI2-AS1Q9NZ38 188 aa12.65□□□□□ -0.38
LMNB1-203ENST00000460265 RNF114Q9Y508 228 aa12.65□□□□□ -0.38
LMNB1-203ENST00000460265 COMPP49747 757 aaPredicted RBP12.65□□□□□ -0.38
LMNB1-203ENST00000460265 BRWD1-AS2P59051 145 aa12.65□□□□□ -0.38
LMNB1-203ENST00000460265 SNURFLB1AK76 121 aa12.65□□□□□ -0.38
LMNB1-203ENST00000460265 SPINK4O60575 86 aa12.65□□□□□ -0.38
LMNB1-203ENST00000460265 HLA-DRB5Q30154 266 aa12.65□□□□□ -0.38
LMNB1-203ENST00000460265 DYSFO75923 2080 aa12.65□□□□□ -0.39
LMNB1-203ENST00000460265 C17orf100A8MU93 164 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 PROP1O75360 226 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 TOX4O94842 621 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 IGKV1-16P04430 117 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 GPX1P07203 203 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 FOXL1Q12952 345 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 NIT1Q86X76 327 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 KMT2EQ8IZD2 1858 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 CA2P00918 260 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 IFI27L2Q9H2X8 130 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 CTRLP40313 264 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 HSPE1P61604 102 aaKnown RBP12.64□□□□□ -0.39
LMNB1-203ENST00000460265 KIAA1644Q3SXP7 199 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 ZNF714Q96N38 554 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 SERTAD4Q9NUC0 356 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 CREBBPQ92793 2442 aa12.64□□□□□ -0.39
LMNB1-203ENST00000460265 REG1AP05451 166 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 ATP5G3P48201 142 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 LINC00310P59036 64 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 MLANAQ16655 118 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 IGFL3Q6UXB1 125 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 SFRP2Q96HF1 295 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 NPVFQ9HCQ7 196 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 C15orf62A8K5M9 175 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 MT-CO2P00403 227 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 OR10J4P0C629 311 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 MOB3BQ86TA1 216 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 OR10G8Q8NGN5 311 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 CCL21O00585 134 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 TEPPQ6URK8 271 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 TMEM144Q7Z5S9 345 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 FAM19A2Q8N3H0 131 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 OR10W1Q8NGF6 305 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 NAT8BQ9UHF3 227 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 WASHC3Q9Y3C0 194 aa12.63□□□□□ -0.39
LMNB1-203ENST00000460265 MRPS16Q9Y3D3 137 aaKnown RBP12.63□□□□□ -0.39
LMNB1-203ENST00000460265 CEACAM4O75871 244 aa12.62□□□□□ -0.39
LMNB1-203ENST00000460265 YPEL3P61236 119 aaPredicted RBP12.62□□□□□ -0.39
LMNB1-203ENST00000460265 ERHP84090 104 aaKnown RBP12.62□□□□□ -0.39
LMNB1-203ENST00000460265 ADIPOQQ15848 244 aa12.62□□□□□ -0.39
LMNB1-203ENST00000460265 AMMECR1LQ6DCA0 310 aa12.62□□□□□ -0.39
LMNB1-203ENST00000460265 CD3EP07766 207 aa12.62□□□□□ -0.39
LMNB1-203ENST00000460265 WNT2P09544 360 aa12.62□□□□□ -0.39
LMNB1-203ENST00000460265 OPRK1P41145 380 aa12.62□□□□□ -0.39
LMNB1-203ENST00000460265 LYPD2Q6UXB3 125 aa12.62□□□□□ -0.39
LMNB1-203ENST00000460265 FLYWCH2Q96CP2 140 aaKnown RBP12.62□□□□□ -0.39
LMNB1-203ENST00000460265 IGHV1-69-2A0A0G2JMI3 117 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 LCN12Q6JVE5 192 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 GNB4Q9HAV0 340 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 LY6HO94772 140 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 C3orf79P0CE67 100 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 IGFBP2P18065 325 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 PSG5Q15238 335 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 GAFA1Q96PS6 74 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 MRPL20Q9BYC9 149 aaKnown RBP12.61□□□□□ -0.39
LMNB1-203ENST00000460265 SLC17A3O00476 420 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 MGST1P10620 155 aaKnown RBP12.61□□□□□ -0.39
LMNB1-203ENST00000460265 COL8A2P25067 703 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 LOXL3P58215 753 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 C17orf58Q2M2W7 97 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 HCP5Q6MZN7 132 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 CDC42EP3Q9UKI2 254 aa12.61□□□□□ -0.39
LMNB1-203ENST00000460265 SLC25A17O43808 307 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 PLAUP00749 431 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 KIR2DS2P43631 304 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 RELBQ01201 579 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 C10orf55Q5SWW7 151 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 TREML4Q6UXN2 200 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 ADTRPQ96IZ2 230 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 GAGE12BA1L429 117 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 NPPCP23582 126 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 ZNF114Q8NC26 417 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 HIVEP3Q5T1R4 2406 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms