RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 PEF1Q9UBV8 284 aaKnown RBP9.61□□□□□ -0.87
HDAC4-206ENST00000460235 SVEP1Q4LDE5 3571 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 FAM24AA6NFZ4 105 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 HMSDA8MTL9 139 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 I3L2K1 104 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 NDUFB8O95169 186 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 HSPB1P04792 205 aaKnown RBP9.6□□□□□ -0.87
HDAC4-206ENST00000460235 CD28P10747 220 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 RELQ04864 619 aaPredicted RBP9.6□□□□□ -0.87
HDAC4-206ENST00000460235 ACOT7LQ6ZUV0 252 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 SLC16A13Q7RTY0 426 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 S100A7AQ86SG5 101 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 TMEM116Q8NCL8 245 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 KLHL30-AS1Q8NEE0 82 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 OR4C12Q96R67 309 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 CITED1Q99966 193 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 CITED2Q99967 270 aaPredicted RBP9.6□□□□□ -0.87
HDAC4-206ENST00000460235 NPVFQ9HCQ7 196 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 OR5AC2Q9NZP5 309 aa9.6□□□□□ -0.87
HDAC4-206ENST00000460235 TET2Q6N021 2002 aaPredicted RBP9.6□□□□□ -0.87
HDAC4-206ENST00000460235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.59□□□□□ -0.87
HDAC4-206ENST00000460235 A0A0D9SG52 128 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 K7EIM0 57 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 M0QZ24 198 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 TAAR5O14804 337 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 GGCTO75223 188 aaKnown RBP9.59□□□□□ -0.87
HDAC4-206ENST00000460235 MPDU1O75352 247 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 TMEM50AO95807 157 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 CFDP00746 253 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-206ENST00000460235 IFNA5P01569 189 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 EWSR1Q01844 656 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDAC4-206ENST00000460235 AKR1C1Q04828 323 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 SLC38A11Q08AI6 406 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 OR2F1Q13607 317 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 ZNF266Q14584 549 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 FAM106AQ4KMX7 169 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 UBAC2Q8NBM4 344 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 TAF15Q92804 592 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDAC4-206ENST00000460235 AQP10Q96PS8 301 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 TMEM147Q9BVK8 224 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 C11orf1Q9H5F2 150 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 KCNIP2Q9NS61 270 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 UQCC1Q9NVA1 299 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 PFDN2Q9UHV9 154 aa9.59□□□□□ -0.87
HDAC4-206ENST00000460235 SMCO3A2RU48 225 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 H0YIZ8 118 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 CLN5O75503 358 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 CST7O76096 145 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 C1QBP02746 253 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 CLEC3BP05452 202 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 MFAP2P55001 183 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 EIF5AP63241 154 aaKnown RBP9.58□□□□□ -0.88
HDAC4-206ENST00000460235 ZFP69Q49AA0 526 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 C10orf99Q6UWK7 81 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 TMEM144Q7Z5S9 345 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 TMEM217Q8N7C4 229 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 C11orf44Q8N8P7 122 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 SCGB1C1Q8TD33 95 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 ACY3Q96HD9 319 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 ST6GAL2Q96JF0 529 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 MFFQ9GZY8 342 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 HSPB11Q9Y547 144 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 ATRQ13535 2644 aa9.58□□□□□ -0.88
HDAC4-206ENST00000460235 TRAV14DV4A0A0A6YYC5 116 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 BORCS7-ASMTA0A0B4J1R7 106 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 A0A1B0GVG6 124 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 IGSF23A1L1A6 192 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 ZFP92A6NM28 416 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 LINC01619G3V211 115 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 TGOLN2O43493 480 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 IGHV3-11P01762 117 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 ARL3P36405 182 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 MYCNOSP40205 109 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 RND2P52198 227 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 SELENOTP62341 195 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 ZNF616Q08AN1 781 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 ZNF345Q14585 488 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 RPEL1Q2QD12 228 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 TCTEX1D4Q5JR98 221 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 TEPPQ6URK8 271 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 CLEC19AQ6UXS0 136 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 ZNF709Q8N972 641 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 OR5C1Q8NGR4 320 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 OR1N2Q8NGR9 330 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 TMEM170AQ8WVE7 144 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 GNB4Q9HAV0 340 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 TNFSF18Q9UNG2 199 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 RNF24Q9Y225 148 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 DMRT1Q9Y5R6 373 aa9.57□□□□□ -0.88
HDAC4-206ENST00000460235 MFSD2BA6NFX1 497 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 I3L521 148 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 CCL24O00175 119 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 ARPC5O15511 151 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 PF4P02776 101 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 OR10J1P30954 320 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 GPR183P32249 361 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 BMI1P35226 326 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
HDAC4-206ENST00000460235 KIAA0141Q14154 515 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms