RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SUB1P53999 127 aaKnown RBP eCLIP4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 LINC00310P59036 64 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 PRSS8Q16651 343 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 LTC4SQ16873 150 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 MSMPQ1L6U9 139 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 CENPWQ5EE01 88 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 SPATA31B1PQ5VZV4 182 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 PVRIGQ6DKI7 326 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 C1orf229Q6ZS94 237 aaPredicted RBP4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 Q6ZWC4 215 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 ATP5L2Q7Z4Y8 100 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 LRP11Q86VZ4 500 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 BAGE3Q86Y29 109 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 BAGE2Q86Y30 109 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 PDPNQ86YL7 162 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 TGIF2LXQ8IUE1 241 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 VKORC1L1Q8N0U8 176 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 SIGLECL1Q8N7X8 197 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 THAP8Q8NA92 274 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 STXBP6Q8NFX7 210 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 OR5AN1Q8NGI8 311 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 SNRNP40Q96DI7 357 aaKnown RBP4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 MBD6Q96DN6 1003 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF503Q96F45 646 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 IGF2BP2-AS1Q96M15 143 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 DNAJC4Q9NNZ3 241 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 NDUFA4L2Q9NRX3 87 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF586Q9NXT0 402 aa4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 HELZ2Q9BYK8 2649 aaKnown RBP4.99□□□□□ -1.61
UBQLN4-202ENST00000459954 NBASA2RRP1 2371 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 NKX6-3A6NJ46 265 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 C22orf46C9J442 243 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 SLC17A3O00476 420 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 PRRG2O14669 202 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 EREGO14944 169 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF253O75346 499 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 OR2J3O76001 311 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 TFF1P04155 84 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 SNRPCP09234 159 aaKnown RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 IRF2P14316 349 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 TNFRSF1AP19438 455 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 BMP5P22003 454 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 CBLN1P23435 193 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 CRYBB3P26998 211 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 CEACAM8P31997 349 aaPredicted RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 MC5RP33032 325 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 IER3P46695 156 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 COMPP49747 757 aaPredicted RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF137PP52743 207 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 TNFAIP6P98066 277 aaPredicted RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 KLF5Q13887 457 aaPredicted RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 PMCHL1Q16048 86 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 IBA57Q5T440 356 aaKnown RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 ETFRF1Q6IPR1 90 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 SEM1Q6ZVN7 128 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 TCF23Q7RTU1 214 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 DMRTC2Q8IXT2 367 aaPredicted RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 OR8I2Q8N0Y5 310 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 LYG1Q8N1E2 194 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 Q8NA96 180 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 TMEM186Q96B77 213 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 GRAMD2BQ96HH9 432 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 KCNS1Q96KK3 526 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 FAM167A-AS1Q96KT0 104 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 HSPB9Q9BQS6 159 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 VAMP8Q9BV40 100 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 SAMD10Q9BYL1 202 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 GCM1Q9NP62 436 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 AURKAIP1Q9NWT8 199 aaPredicted RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 FZR1Q9UM11 496 aa4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 AMMECR1Q9Y4X0 333 aaPredicted RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 SOX21Q9Y651 276 aaPredicted RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 FASNP49327 2511 aaKnown RBP4.98□□□□□ -1.61
UBQLN4-202ENST00000459954 PLCE1Q9P212 2302 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 IGKV1OR2-108A0A075B7D4 117 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 IGHV3OR15-7A0A075B7D8 119 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 TCRBV4S1A1TA0A5B7 111 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 GRIFINA4D1Z8 144 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 FAM231BA6NCW3 169 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 GGTLC3B5MD39 225 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 K7EM74 188 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 M0R1B8 84 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 OR7C2O60412 319 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF324O75467 553 aaPredicted RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 IGHV1-46P01743 117 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 RPLP1P05386 114 aaKnown RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 LINC00614P0C842 121 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 SAA1P0DJI8 122 aaPredicted RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 SELLP14151 372 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 MYCNOSP40205 109 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 CTRLP40313 264 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 CA7P43166 264 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 LGALS7P47929 136 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF83P51522 516 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 PRRX1P54821 245 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 PLP1P60201 277 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 RPL8P62917 257 aaKnown RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 SUMO1P63165 101 aaKnown RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 CT83Q5H943 113 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 C1orf185Q5T7R7 199 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms