RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 MRPL27Q9P0M9 148 aaKnown RBP8.2□□□□□ -1.1
UBR4-208ENST00000459947 STRAPQ9Y3F4 350 aaKnown RBP8.2□□□□□ -1.1
UBR4-208ENST00000459947 SYNJ2BPP57105 145 aa8.2□□□□□ -1.1
UBR4-208ENST00000459947 TMEM190Q8WZ59 177 aa8.2□□□□□ -1.1
UBR4-208ENST00000459947 SMIM8Q96KF7 97 aa8.2□□□□□ -1.1
UBR4-208ENST00000459947 C2orf50Q96LR7 162 aa8.2□□□□□ -1.1
UBR4-208ENST00000459947 CLN5O75503 358 aa8.2□□□□□ -1.1
UBR4-208ENST00000459947 ID3Q02535 119 aa8.2□□□□□ -1.1
UBR4-208ENST00000459947 L7N2F9 121 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 IFNA4P05014 189 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 MFAP2P55001 183 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 VAMP2P63027 116 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 OR4D5Q8NGN0 318 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 ZNF256Q9Y2P7 627 aaPredicted RBP8.19□□□□□ -1.1
UBR4-208ENST00000459947 FNDC10F2Z333 226 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 TSC22D2O75157 780 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 PINX1Q96BK5 328 aaKnown RBP8.19□□□□□ -1.1
UBR4-208ENST00000459947 DMRT1Q9Y5R6 373 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 C15orf62A8K5M9 175 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 G3V4G9 280 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 PFDN1O60925 122 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 CMC4P56277 68 aaPredicted RBP8.19□□□□□ -1.1
UBR4-208ENST00000459947 CD69Q07108 199 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 HIST2H2BDQ6DRA6 164 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 LAMTOR1Q6IAA8 161 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 PRR13Q9NZ81 148 aa8.19□□□□□ -1.1
UBR4-208ENST00000459947 C5orf51A6NDU8 294 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 IGLV1-51P01701 117 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 SPINK9Q5DT21 86 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 SLC16A13Q7RTY0 426 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 DAZ1Q9NQZ3 744 aaKnown RBP8.18□□□□□ -1.1
UBR4-208ENST00000459947 OR2C1O95371 312 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 YPEL3P61236 119 aaPredicted RBP8.18□□□□□ -1.1
UBR4-208ENST00000459947 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 NRARPQ7Z6K4 114 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 TMEM116Q8NCL8 245 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 ASB13Q8WXK3 278 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 RNF24Q9Y225 148 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 A0A1W2PS18 150 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 CSN3P07498 182 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 GRAMD2BQ96HH9 432 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 SEC22CQ9BRL7 303 aa8.18□□□□□ -1.1
UBR4-208ENST00000459947 PPP5D1E7EU14 171 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 TMEM50AO95807 157 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 RLN2P04090 185 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 C8orf88P0DMB2 117 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 EIF2B2P49770 351 aaKnown RBP8.17□□□□□ -1.1
UBR4-208ENST00000459947 DEFA5Q01523 94 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 Q8WTZ3 238 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 OR2T8A6NH00 312 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 C2orf70A6NJV1 201 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 ADAP1O75689 374 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 PET100P0DJ07 73 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 C19orf35Q6ZS72 473 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 UBAC2Q8NBM4 344 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 GGACTQ9BVM4 153 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 PSENENQ9NZ42 101 aa8.17□□□□□ -1.1
UBR4-208ENST00000459947 ZNF320A2RRD8 509 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 DLK1P80370 383 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 UXS1Q8NBZ7 420 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 ANK2Q01484 3957 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 IGHV3-23P01764 117 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 CTSGP08311 255 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 IFITM3Q01628 133 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 OR52B4Q8NGK2 314 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 MGAT4CQ9UBM8 478 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 FAM25EA8MYX2 175 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 IAPPP10997 89 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 DEFA6Q01524 100 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 NMES1Q9C002 83 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 GSKIPQ9P0R6 139 aa8.16□□□□□ -1.1
UBR4-208ENST00000459947 C7orf66A4D0T2 115 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 RGS21Q2M5E4 152 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 METTL26Q96S19 204 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 AURKAIP1Q9NWT8 199 aaPredicted RBP8.15□□□□□ -1.1
UBR4-208ENST00000459947 SSNA1O43805 119 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 SCGB1D2O95969 90 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 FOLR2P14207 255 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 OR10J1P30954 320 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 RND2P52198 227 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 OR8G2PQ6IF36 304 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 ZC4H2Q9NQZ6 224 aa8.15□□□□□ -1.1
UBR4-208ENST00000459947 TOMM40O96008 361 aa8.15□□□□□ -1.11
UBR4-208ENST00000459947 GTSCR1Q86UQ5 136 aa8.15□□□□□ -1.11
UBR4-208ENST00000459947 TRGV9Q99603 122 aa8.15□□□□□ -1.11
UBR4-208ENST00000459947 PAIP2BQ9ULR5 123 aaKnown RBP8.15□□□□□ -1.11
UBR4-208ENST00000459947 SLC45A2Q9UMX9 530 aa8.15□□□□□ -1.11
UBR4-208ENST00000459947 TRAV2A0A0B4J234 112 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 GP9P14770 177 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 CBLN1P23435 193 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 SPANXN5Q5MJ07 72 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 PRSS54Q6PEW0 395 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 OR10P1Q8NGE3 313 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 OR10C1Q96KK4 312 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 S4R3C0 116 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 TMEM213A2RRL7 107 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
UBR4-208ENST00000459947 SSSCA1O60232 199 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms