RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 STPG4Q8N801 248 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.96□□□□□ -1.3
VPS50-208ENST00000458707 WIPF2Q8TF74 440 aaPredicted RBP6.96□□□□□ -1.3
VPS50-208ENST00000458707 LRRC29Q8WV35 223 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 IGF2BP2-AS1Q96M15 143 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 RCHY1Q96PM5 261 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 NABP2Q9BQ15 211 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 C19orf24Q9BVV8 132 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 DEFB127Q9H1M4 99 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 TECRQ9NZ01 308 aaKnown RBP6.96□□□□□ -1.3
VPS50-208ENST00000458707 CLCF1Q9UBD9 225 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 PPIAL4EA0A075B759 164 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 PPIAL4CA0A0B4J2A2 164 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 A0A1W2PRE2 83 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 PPIAL4DF5H284 164 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 G3V4G9 280 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 TIMM8AO60220 97 aaPredicted RBP6.95□□□□□ -1.3
VPS50-208ENST00000458707 PPIAL4FP0DN26 164 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 PPIAL4GP0DN37 164 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 CFHR2P36980 270 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 ATP5IP56385 69 aaPredicted RBP6.95□□□□□ -1.3
VPS50-208ENST00000458707 PAX2Q02962 417 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 MZT1Q08AG7 82 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 EDDM3AQ14507 147 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 PSG5Q15238 335 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 LTC4SQ16873 150 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 C1orf229Q6ZS94 237 aaPredicted RBP6.95□□□□□ -1.3
VPS50-208ENST00000458707 FAM214BQ7L5A3 538 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 DOLPP1Q86YN1 238 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 UBALD2Q8IYN6 164 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 C1orf162Q8NEQ5 155 aaPredicted RBP6.95□□□□□ -1.3
VPS50-208ENST00000458707 CACNG8Q8WXS5 425 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 STARD4Q96DR4 205 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 FAM103A1Q9BTL3 118 aaKnown RBP6.95□□□□□ -1.3
VPS50-208ENST00000458707 COMMD5Q9GZQ3 224 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 FAM234AQ9H0X4 552 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 RNASE7Q9H1E1 156 aaKnown RBP6.95□□□□□ -1.3
VPS50-208ENST00000458707 IDI2-AS1Q9NZ38 188 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 TNFRSF18Q9Y5U5 241 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 VPS13AQ96RL7 3174 aa6.95□□□□□ -1.3
VPS50-208ENST00000458707 IZUMO1RA6ND01 250 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 GGTLC3B5MD39 225 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 HYPMO75409 117 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 C3orf79P0CE67 100 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 COL8A2P25067 703 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 SRIP30626 198 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 MMDQ15546 238 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 IBA57Q5T440 356 aaKnown RBP6.94□□□□□ -1.3
VPS50-208ENST00000458707 PPP1R35Q8TAP8 253 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 TSKUQ8WUA8 353 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
VPS50-208ENST00000458707 MEGF9Q9H1U4 602 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 ENY2Q9NPA8 101 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 DUSP13Q9UII6 198 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 CDC42EP3Q9UKI2 254 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 ZNF257Q9Y2Q1 563 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 IGKV1OR2-108A0A075B7D4 117 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 TRAV26-1A0A087WT03 109 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 A0A1W2PNU3 283 aaPredicted RBP6.94□□□□□ -1.3
VPS50-208ENST00000458707 DPRXA6NFQ7 191 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 ACTL6BO94805 426 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 TSPAN13O95857 204 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 IGLV1-44P01699 117 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 CLEC3BP05452 202 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 CECR9P0C854 216 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 ZNF883P0CG24 379 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 TAS2R45P59539 299 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 BATFQ16520 125 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 KIAA1644Q3SXP7 199 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 RIF1Q5UIP0 2472 aaKnown RBP6.94□□□□□ -1.3
VPS50-208ENST00000458707 FAM231DQ6ZW35 169 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 KLHDC1Q8N7A1 406 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 ZNF439Q8NDP4 499 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 MBD6Q96DN6 1003 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 PLPPR2Q96GM1 343 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 ADTRPQ96IZ2 230 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 CALYQ9NYX4 217 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 LAMTOR2Q9Y2Q5 125 aa6.94□□□□□ -1.3
VPS50-208ENST00000458707 FLNBO75369 2602 aaKnown RBP6.93□□□□□ -1.3
VPS50-208ENST00000458707 FAM208BQ5VWN6 2430 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 OR11H12B2RN74 326 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 AGFG2O95081 481 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 SAA2P0DJI9 122 aaPredicted RBP6.93□□□□□ -1.3
VPS50-208ENST00000458707 PMCHP20382 165 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 TNFSF4P23510 183 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 ARG2P78540 354 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 PRCDQ00LT1 54 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 FXYD3Q14802 87 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 PMCHL1Q16048 86 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 C17orf58Q2M2W7 97 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 C2orf83Q53S99 150 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 CT45A1Q5HYN5 189 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 TCTEX1D4Q5JR98 221 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 OR11H1Q8NG94 326 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 OR11H2Q8NH07 326 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 CT45A3Q8NHU0 189 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 C18orf32Q8TCD1 76 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 FER1L6-AS2Q96M78 137 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 MRPL32Q9BYC8 188 aaKnown RBP6.93□□□□□ -1.3
VPS50-208ENST00000458707 RAB9BQ9NP90 201 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms