RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ADMP35318 185 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 HAPLN4Q86UW8 402 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 DTD1Q8TEA8 209 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 TMEM190Q8WZ59 177 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 B9D2Q9BPU9 175 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 CHRDL1Q9BU40 450 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 C20orf24Q9BUV8 137 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 DAZ1Q9NQZ3 744 aaKnown RBP12.25□□□□□ -0.45
CD28-203ENST00000458610 FLVCR2Q9UPI3 526 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 TRAV25A0A0B4J276 109 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 C15orf62A8K5M9 175 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 F8W735 103 aaPredicted RBP12.24□□□□□ -0.45
CD28-203ENST00000458610 PITX3O75364 302 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 YIF1AO95070 293 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 TCRBP04435 133 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 HOXB5P09067 269 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 C8orf88P0DMB2 117 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 NPY1RP25929 384 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 BTCP35070 178 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 RPP30P78346 268 aaKnown RBP12.24□□□□□ -0.45
CD28-203ENST00000458610 DHRS2Q13268 280 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 CD300EQ496F6 205 aaPredicted RBP12.24□□□□□ -0.45
CD28-203ENST00000458610 TM4SF20Q53R12 229 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 UNQ9165/PRO28630Q6UXU0 137 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 SORL1Q92673 2214 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 CIB3Q96Q77 187 aaPredicted RBP12.24□□□□□ -0.45
CD28-203ENST00000458610 RBKSQ9H477 322 aa12.24□□□□□ -0.45
CD28-203ENST00000458610 FAM240BA0A1B0GVZ2 78 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 NXPH3O95157 252 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 TMEM50AO95807 157 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 IGHV3-48P01763 117 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 NHLRC4P0CG21 123 aaPredicted RBP12.23□□□□□ -0.45
CD28-203ENST00000458610 ANXA7P20073 488 aaKnown RBP12.23□□□□□ -0.45
CD28-203ENST00000458610 BMI1P35226 326 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 GGNBP1Q5YKI7 109 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 LAMTOR1Q6IAA8 161 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 ADAMTSL5Q6ZMM2 481 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 RBPMS2Q6ZRY4 209 aaKnown RBP12.23□□□□□ -0.45
CD28-203ENST00000458610 OR4X1Q8NH49 305 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 GINS3Q9BRX5 216 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 C20orf85Q9H1P6 137 aa12.23□□□□□ -0.45
CD28-203ENST00000458610 CLN5O75503 358 aa12.22□□□□□ -0.45
CD28-203ENST00000458610 RAB11AP62491 216 aa12.22□□□□□ -0.45
CD28-203ENST00000458610 GUCA2BQ16661 112 aa12.22□□□□□ -0.45
CD28-203ENST00000458610 ZNF600Q6ZNG1 722 aa12.22□□□□□ -0.45
CD28-203ENST00000458610 IFNA4P05014 189 aa12.21□□□□□ -0.45
CD28-203ENST00000458610 ASAH1Q13510 395 aa12.21□□□□□ -0.45
CD28-203ENST00000458610 MITD1Q8WV92 249 aa12.21□□□□□ -0.45
CD28-203ENST00000458610 CACNG8Q8WXS5 425 aa12.21□□□□□ -0.45
CD28-203ENST00000458610 FNDC4Q9H6D8 234 aaPredicted RBP12.21□□□□□ -0.45
CD28-203ENST00000458610 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 IZUMO1RA6ND01 250 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 ZNF785A8K8V0 405 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 SYNGR2O43760 224 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 UPK1BO75841 260 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 H2AFB2P0C5Z0 115 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 MLANAQ16655 118 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 SLC16A13Q7RTY0 426 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 Q8N1Y9 231 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 TMEM116Q8NCL8 245 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 OR10C1Q96KK4 312 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 MLXQ9UH92 298 aa12.2□□□□□ -0.46
CD28-203ENST00000458610 TRAV6A0A075B6T7 132 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 A8MZ25 164 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 WRBO00258 174 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 CD5P06127 495 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 GPX4P36969 197 aaPredicted RBP12.19□□□□□ -0.46
CD28-203ENST00000458610 PRSS54Q6PEW0 395 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 BTNL8Q6UX41 500 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 OR1S2Q8NGQ3 325 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 TUBA4BQ9H853 241 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 NUDT15Q9NV35 164 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 SMPXQ9UHP9 88 aa12.19□□□□□ -0.46
CD28-203ENST00000458610 IGHV7-4-1A0A0J9YVY3 117 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 ADAP1O75689 374 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 NKX2-1P43699 371 aaPredicted RBP12.18□□□□□ -0.46
CD28-203ENST00000458610 RND2P52198 227 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 DEFA1P59665 94 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 DEFA3P59666 94 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 CD81P60033 236 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 ENKURQ8TC29 256 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 Q8WTZ3 238 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 NEURL2Q9BR09 285 aa12.18□□□□□ -0.46
CD28-203ENST00000458610 PUS1Q9Y606 427 aaKnown RBP eCLIP12.18□□□□□ -0.46
CD28-203ENST00000458610 A0A1W2PS18 150 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 EDN2P20800 178 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 NPPCP23582 126 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 YPEL3P61236 119 aaPredicted RBP12.17□□□□□ -0.46
CD28-203ENST00000458610 ID3Q02535 119 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 OR52B4Q8NGK2 314 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 ZNF431Q8TF32 576 aaPredicted RBP12.17□□□□□ -0.46
CD28-203ENST00000458610 TMEM170AQ8WVE7 144 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 WDR89Q96FK6 387 aaPredicted RBP12.17□□□□□ -0.46
CD28-203ENST00000458610 NARS2Q96I59 477 aaKnown RBP12.17□□□□□ -0.46
CD28-203ENST00000458610 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 SPAG8Q99932 426 aaPredicted RBP12.17□□□□□ -0.46
CD28-203ENST00000458610 RHPN1-AS1Q9BWJ2 59 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 TMEM231Q9H6L2 316 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms