RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 FOXA2Q9Y261 457 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-204ENST00000455883 FAM181BA6NEQ2 426 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 NPFFO15130 113 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 GNG10P50151 68 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 FAM231DQ6ZW35 169 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 NEU4Q8WWR8 484 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-204ENST00000455883 ATP6V0BQ99437 205 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 CCL26Q9Y258 94 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 CBLN1P23435 193 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 TEX38Q6PEX7 206 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 FAM89BQ8N5H3 189 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 PPIAL4EA0A075B759 164 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 LOC105371267A0A1B0GV96 52 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 PPIAL4DF5H284 164 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 IGKCP01834 107 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 PPIAL4FP0DN26 164 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 ACRP10323 421 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 CRYBB3P26998 211 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 LDLRAD2Q5SZI1 272 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 PRSS27Q9BQR3 290 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 PPIAL4AQ9Y536 164 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 TNRC6BQ9UPQ9 1833 aaKnown RBP4.41□□□□□ -1.7
CSMD3-204ENST00000455883 A0A1W2PNR3 127 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 RRHO14718 337 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 PPIHO43447 177 aaKnown RBP4.41□□□□□ -1.7
CSMD3-204ENST00000455883 HCRTO43612 131 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 FUT5Q11128 374 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 RNF186Q9NXI6 227 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 SLC25A53Q5H9E4 307 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 PTCRAQ6ISU1 281 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-204ENST00000455883 SLC25A28Q96A46 364 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 SOCS1O15524 211 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 AZU1P20160 251 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 USMG5Q96IX5 58 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF48Q96MX3 618 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-204ENST00000455883 K7ESM1 405 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 LINC00696Q6ZRV3 163 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 A0A096LPE4 126 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 MYMXA0A1B0GTQ4 84 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 A0A1W2PPZ6 126 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 TCRBV4S1A1TA0A5B7 111 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 UBL5Q9BZL1 73 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 SEMA5BQ9P283 1151 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 NXPH1P58417 271 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 CFAP161Q6P656 301 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 PPP1R27Q86WC6 154 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 RFNGQ9Y644 331 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 HLA-DMBP28068 263 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 ATP5EP2Q5VTU8 51 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 IGFBPL1Q8WX77 278 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 IFI27L2Q9H2X8 130 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM74BQ9NUR3 256 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 TRAV2A0A0B4J234 112 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM170BQ5T4T1 132 aa4.41□□□□□ -1.7
CSMD3-204ENST00000455883 GLI4P10075 376 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 H0YIZ8 118 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 VCYO14598 125 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 IFITM1P13164 125 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 PRCDQ00LT1 54 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF56Q15929 161 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 CXorf66Q5JRM2 361 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-204ENST00000455883 MBNL2Q5VZF2 373 aaKnown RBP4.4□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM171Q8WVE6 324 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 BADQ92934 168 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 HCFC1R1Q9NWW0 138 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 IGLV1-36A0A0B4J1U3 117 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 A8MWP6 167 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 PRR32B1ATL7 298 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 F8WEM9 126 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 CD300EQ496F6 205 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-204ENST00000455883 OCIAD2Q56VL3 154 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 FAM90A2PQ658T7 463 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 IDI2-AS1Q9NZ38 188 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 NBEAL1Q6ZS30 2694 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 A0A1W2PR80 420 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 COL9A3Q14050 684 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-204ENST00000455883 TEX45Q8NA69 505 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 ATP6V0E2Q8NHE4 81 aa4.4□□□□□ -1.7
CSMD3-204ENST00000455883 GATA3P23771 443 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 SSTR5P35346 364 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 ID3Q02535 119 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 COQ2Q96H96 371 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 LINC00477Q96M19 166 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 RPUSD1Q9UJJ7 312 aaKnown RBP4.4□□□□□ -1.71
CSMD3-204ENST00000455883 DSCR9P59020 149 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 EGR4Q05215 589 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 C9orf139Q6ZV77 190 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 GVQW1Q8N7I0 195 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 REPIN1Q9BWE0 567 aaKnown RBP4.4□□□□□ -1.71
CSMD3-204ENST00000455883 TIMM23O14925 209 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 ANKRD34AQ69YU3 496 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 LINC00305Q7Z4B0 112 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 DTX4Q9Y2E6 619 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 MGAM2Q2M2H8 2515 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 LOC102723996A0A087X1L8 192 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 TRAV13-2A0A0B4J235 113 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 APOHP02749 345 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-204ENST00000455883 CCL3P10147 92 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 COL9A1P20849 921 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms