RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 FRAS1Q86XX4 4008 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 MEIS3P1A6NDR6 274 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 INS-IGF2F8WCM5 200 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 DEFB4AO15263 64 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 CLEC2LP0C7M8 214 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 HLA-DMBP28068 263 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 PRSS3P35030 304 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 NUTF2P61970 127 aaKnown RBP5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 TSPAN5P62079 268 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 PHLDA2Q53GA4 152 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 LEMD1Q68G75 181 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 PVRIGQ6DKI7 326 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 SLC35G3Q8N808 338 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 CHAC2Q8WUX2 184 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 ST8SIA2Q92186 375 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 SEC22AQ96IW7 307 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 PDCD10Q9BUL8 212 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 PUS1Q9Y606 427 aaKnown RBP eCLIP5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 AGRNO00468 2067 aa5.84□□□□□ -1.47
NIF3L1-209ENST00000454952 IGHV4-4A0A075B6R2 117 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 IGHV3OR16-13A0A075B7E8 117 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 TRAV30A0A087WSZ9 112 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 IGHV3-74A0A0B4J1X5 117 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 IGHV4-28A0A0C4DH34 117 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 HELTA6NFD8 242 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 DBX1A6NMT0 343 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 ZNF705EA8MWA4 302 aaPredicted RBP5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 ANKRD65E5RJM6 399 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 P0DMU3 169 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 FAM231AP0DMU4 169 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 FAM231CP0DMU5 169 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 MED14OSP0DP75 135 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 NPY1RP25929 384 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 HRH1P35367 487 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 AP2S1P53680 142 aaPredicted RBP5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 UCP3P55916 312 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 TAS2R20P59543 309 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 TRPT1Q86TN4 253 aaKnown RBP5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 TBC1D26Q86UD7 250 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 SAMD12Q8N8I0 201 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 STXBP6Q8NFX7 210 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 MRGPRFQ96AM1 343 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 C1QTNF4Q9BXJ3 329 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 FXYD6Q9H0Q3 95 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 CDIP1Q9H305 208 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 SCPEP1Q9HB40 452 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 ENY2Q9NPA8 101 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 TBC1D24Q9ULP9 559 aa5.83□□□□□ -1.48
NIF3L1-209ENST00000454952 SMIM31A0A1B0GVY4 71 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 RPS10-NUDT3A0A1W2PQS6 291 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 K7EQG2 157 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 TMEM50AO95807 157 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 IFNA17P01571 189 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 IGHV3-48P01763 117 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 AMBPP02760 352 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 CRYBB3P26998 211 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 HLA-DMAP28067 261 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 RCVRNP35243 200 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 RPL5P46777 297 aaKnown RBP5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 P2RY1P47900 373 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 TMEM230Q96A57 120 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 ZNF486Q96H40 463 aaPredicted RBP5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 NDUFAF3Q9BU61 184 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 MUC4Q99102 2169 aa5.82□□□□□ -1.48
NIF3L1-209ENST00000454952 DEFB131BA0A096LNP1 70 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 IGHV3-66A0A0C4DH42 116 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 CLN5O75503 358 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 B3GALNT1O75752 331 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 APOHP02749 345 aaPredicted RBP5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 GIG44P09565 113 aaPredicted RBP5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 ZNF688P0C7X2 276 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 RBMY1A1P0DJD3 496 aaKnown RBP5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 RBMY1CP0DJD4 496 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 OPRK1P41145 380 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 HOXA1P49639 335 aaPredicted RBP5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 AKR1C2P52895 323 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 RND3P61587 244 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 SNRPD3P62318 126 aaKnown RBP5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 RBMY1FQ15415 496 aaKnown RBP5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 ACTL10Q5JWF8 245 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 Q6ZTC4 211 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 LYSMD2Q8IV50 215 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 POM121L12Q8N7R1 296 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 OR4X1Q8NH49 305 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 GPX8Q8TED1 209 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 RNF167Q9H6Y7 350 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 SEPSECSQ9HD40 501 aaKnown RBP5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 VCX3AQ9NNX9 186 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 CACFD1Q9UGQ2 172 aa5.81□□□□□ -1.48
NIF3L1-209ENST00000454952 A0A1B0GU03 582 aa5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 TEX48A0A1B0GUV7 120 aa5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 TMEM189A5PLL7 270 aa5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 GSTZ1O43708 216 aaPredicted RBP5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 PGAM2P15259 253 aa5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 NUP62P37198 522 aaPredicted RBP5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 DHRS2Q13268 280 aa5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 NEDD8Q15843 81 aa5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 SOHLH1Q5JUK2 328 aa5.8□□□□□ -1.48
NIF3L1-209ENST00000454952 FAM24BQ8N5W8 94 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms