RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 FABP12A6NFH5 140 aa8.95□□□□□ -0.98
USP40-210ENST00000454354 TOMM20LQ6UXN7 152 aa8.95□□□□□ -0.98
USP40-210ENST00000454354 ZNF600Q6ZNG1 722 aa8.95□□□□□ -0.98
USP40-210ENST00000454354 IL22RA2Q969J5 263 aa8.95□□□□□ -0.98
USP40-210ENST00000454354 TRIM63Q969Q1 353 aa8.95□□□□□ -0.98
USP40-210ENST00000454354 RNF2Q99496 336 aa8.95□□□□□ -0.98
USP40-210ENST00000454354 GINS3Q9BRX5 216 aa8.95□□□□□ -0.98
USP40-210ENST00000454354 FNDC4Q9H6D8 234 aaPredicted RBP8.95□□□□□ -0.98
USP40-210ENST00000454354 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
USP40-210ENST00000454354 TRAV14DV4A0A0A6YYC5 116 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 CLN5O75503 358 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 YIF1AO95070 293 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 TMEM50AO95807 157 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 HTR2BP41595 481 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 TMEM187Q14656 261 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 TMEM268Q5VZI3 342 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 FAM90A2PQ658T7 463 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 ZFAND6Q6FIF0 208 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 OR4X1Q8NH49 305 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 GPR146Q96CH1 333 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 SCGB3A2Q96PL1 93 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 VSIRQ9H7M9 311 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 MRPL36Q9P0J6 103 aaKnown RBP8.94□□□□□ -0.98
USP40-210ENST00000454354 CACNG5Q9UF02 275 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 CACFD1Q9UGQ2 172 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 UBQLN2Q9UHD9 624 aa8.94□□□□□ -0.98
USP40-210ENST00000454354 CD5P06127 495 aa8.93□□□□□ -0.98
USP40-210ENST00000454354 OPRK1P41145 380 aa8.93□□□□□ -0.98
USP40-210ENST00000454354 SUPT4H1P63272 117 aaKnown RBP8.93□□□□□ -0.98
USP40-210ENST00000454354 KLF9Q13886 244 aaPredicted RBP8.93□□□□□ -0.98
USP40-210ENST00000454354 C2orf83Q53S99 150 aa8.93□□□□□ -0.98
USP40-210ENST00000454354 IL17DQ8TAD2 202 aa8.93□□□□□ -0.98
USP40-210ENST00000454354 RBM38Q9H0Z9 239 aaKnown RBP8.93□□□□□ -0.98
USP40-210ENST00000454354 MCUBQ9NWR8 336 aa8.93□□□□□ -0.98
USP40-210ENST00000454354 TP53TG1Q9Y2A0 90 aa8.93□□□□□ -0.98
USP40-210ENST00000454354 KCNIP3Q9Y2W7 256 aa8.93□□□□□ -0.98
USP40-210ENST00000454354 PUS1Q9Y606 427 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP40-210ENST00000454354 V9GYH0 126 aa8.93□□□□□ -0.98
USP40-210ENST00000454354 ALMS1Q8TCU4 4167 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 IGHV3-49A0A0A0MS15 119 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 A0A0B4J2A0 478 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 KIR2DL5BA0A0G2JN68 375 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 KIR2DL5BA0A0G2JPC4 375 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 LCE6AA0A183 80 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 A0A1B0GU03 582 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 SULT1A3P0DMM9 295 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 SULT1A4P0DMN0 295 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 BMI1P35226 326 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 FAUP35544 74 aaKnown RBP8.92□□□□□ -0.98
USP40-210ENST00000454354 APOC4P55056 127 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 ZNF79Q15937 498 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 NMSQ5H8A3 153 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 Q6ZWC4 215 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 WFDC3Q8IUB2 231 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 KIR2DL5AQ8N109 375 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 KIR2DL5BQ8NHK3 375 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 DEDD2Q8WXF8 326 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 HEYLQ9NQ87 328 aaPredicted RBP8.92□□□□□ -0.98
USP40-210ENST00000454354 SHPKQ9UHJ6 478 aa8.92□□□□□ -0.98
USP40-210ENST00000454354 IGHV3OR16-13A0A075B7E8 117 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 IGHV3-74A0A0B4J1X5 117 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 RPS10-NUDT3A0A1W2PQS6 291 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 ZNF701M0R085 212 aaPredicted RBP8.91□□□□□ -0.98
USP40-210ENST00000454354 UBE2CO00762 179 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 SCGB2A1O75556 95 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 IGKV1-17P01599 117 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 APOHP02749 345 aaPredicted RBP8.91□□□□□ -0.98
USP40-210ENST00000454354 SLC25A4P12235 298 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 CMC4P56277 68 aaPredicted RBP8.91□□□□□ -0.98
USP40-210ENST00000454354 AP3S2P59780 193 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 SRPXP78539 464 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 CCDC190Q86UF4 302 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 SLC24A4Q8NFF2 622 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 RNASEH2CQ8TDP1 164 aaKnown RBP8.91□□□□□ -0.98
USP40-210ENST00000454354 TMEM170AQ8WVE7 144 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 ST8SIA2Q92186 375 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 HSPB7Q9UBY9 170 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 AGRNO00468 2067 aa8.91□□□□□ -0.98
USP40-210ENST00000454354 TRAV30A0A087WSZ9 112 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 CEBPZOSA8MTT3 80 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 IGLC1P0CG04 106 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 ANXA3P12429 323 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 AKR1C4P17516 323 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 CRYBB3P26998 211 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 CCR6P51684 374 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 TNFRSF9Q07011 255 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 SMCO1Q147U7 214 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 MLANAQ16655 118 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 PYDC2Q56P42 97 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 PRSS54Q6PEW0 395 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 TCF24Q7RTU0 167 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 LILRB2Q8N423 598 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 TOMM5Q8N4H5 51 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 TMEM231Q9H6L2 316 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 MAP6D1Q9H9H5 199 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 PRR13Q9NZ81 148 aa8.9□□□□□ -0.98
USP40-210ENST00000454354 HYDINQ4G0P3 5121 aa8.9□□□□□ -0.99
USP40-210ENST00000454354 PIGBOS1A0A0B4J2F0 54 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms