RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SPSB3Q6PJ21 355 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 SSX8Q7RTT4 187 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 OR5A2Q8NGI9 324 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 ZNRF2Q8NHG8 242 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 GALNT14Q96FL9 552 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 HSPB9Q9BQS6 159 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF471Q9BX82 626 aaPredicted RBP6.27□□□□□ -1.41
BRCC3-208ENST00000453705 TMEM222Q9H0R3 208 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 MRPL16Q9NX20 251 aaKnown RBP6.27□□□□□ -1.41
BRCC3-208ENST00000453705 NRASP01111 189 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 PMP2P02689 132 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 CHATP28329 748 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 CTRLP40313 264 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 FABP6P51161 128 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 RHEBQ15382 184 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 EIF5AL1Q6IS14 154 aaKnown RBP6.27□□□□□ -1.41
BRCC3-208ENST00000453705 C11orf87Q6NUJ2 197 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 TRAPPC6BQ86SZ2 158 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 OR2D2Q9H210 308 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 RPS10P5Q9NQ39 176 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF331Q9NQX6 463 aaPredicted RBP6.27□□□□□ -1.41
BRCC3-208ENST00000453705 IGKV1-27A0A075B6S5 117 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 C7orf77A4D0Y5 90 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF705EA8MWA4 302 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-208ENST00000453705 CGAP01215 116 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 IGLV1-44P01699 117 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 FCGR3AP08637 254 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 FGF6P10767 208 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 BLVRBP30043 206 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-208ENST00000453705 IL2RGP31785 369 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 GPR183P32249 361 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF92Q03936 586 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 PMAIP1Q13794 54 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 MPV17LQ2QL34 196 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF324BQ6AW86 544 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-208ENST00000453705 RASL11AQ6T310 242 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 TOMM20LQ6UXN7 152 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 MRPL55Q7Z7F7 128 aaKnown RBP6.26□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF664Q8N3J9 261 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 OR10AD1Q8NGE0 317 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 OR5AP2Q8NGF4 316 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 C19orf24Q9BVV8 132 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 KCNJ16Q9NPI9 418 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 KNTC1P50748 2209 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 NBEAQ8NFP9 2946 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 MYO7BQ6PIF6 2116 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 TMEM235A6NFC5 223 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 F8W735 103 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-208ENST00000453705 TPT1P13693 172 aaKnown RBP6.26□□□□□ -1.41
BRCC3-208ENST00000453705 HSPE1P61604 102 aaKnown RBP6.26□□□□□ -1.41
BRCC3-208ENST00000453705 GAGE13Q4V321 117 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 LRRC10Q5BKY1 277 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 COL5A1-AS1Q5SY13 56 aa6.26□□□□□ -1.41
BRCC3-208ENST00000453705 TRAV30A0A087WSZ9 112 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 J3KT08 172 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 SOCS1O15524 211 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 CLDN1O95832 211 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 IGKV3-15P01624 115 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 CD99P14209 185 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
BRCC3-208ENST00000453705 RND2P52198 227 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 KHDC3LQ587J8 217 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 C1orf194Q5T5A4 169 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 SLC35E3Q7Z769 313 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF101Q8IZC7 436 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 BLNKQ8WV28 456 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 OR5P3Q8WZ94 311 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 BORCS8Q96FH0 119 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 TMEM126AQ9H061 195 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 SETXQ7Z333 2677 aaKnown RBP6.25□□□□□ -1.41
BRCC3-208ENST00000453705 IQCF6A8MYZ5 107 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 C9JAW5 83 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 K7ENP7 123 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 P01737 135 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 NDUFA6P56556 154 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 RBM11P57052 281 aaKnown RBP6.25□□□□□ -1.41
BRCC3-208ENST00000453705 DAZAP2Q15038 168 aaPredicted RBP6.25□□□□□ -1.41
BRCC3-208ENST00000453705 ZFAND6Q6FIF0 208 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF880Q6PDB4 577 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 H1FOOQ8IZA3 346 aaPredicted RBP6.25□□□□□ -1.41
BRCC3-208ENST00000453705 OR1J1Q8NGS3 322 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 SELENOIQ9C0D9 397 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 HES4Q9HCC6 221 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 C19orf73Q9NVV2 129 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 HIGD1AQ9Y241 93 aa6.25□□□□□ -1.41
BRCC3-208ENST00000453705 MED12Q93074 2177 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF503-AS2A6NEH8 195 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 CRXO43186 299 aaPredicted RBP6.24□□□□□ -1.41
BRCC3-208ENST00000453705 PDCD6O75340 191 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 NDUFB4O95168 129 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 OR9G9P0C7N8 305 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 PTHLHP12272 177 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 FGF12P61328 243 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 PSG7Q13046 419 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 C1QL2Q7Z5L3 287 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 MKXQ8IYA7 352 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 ARHGAP5-AS1Q96IT6 56 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 GPER1Q99527 375 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 ESM1Q9NQ30 184 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms