RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 TMEM126AQ9H061 195 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 ENY2Q9NPA8 101 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 WNT16Q9UBV4 365 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 INSIG2Q9Y5U4 225 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 MUC22E2RYF6 1773 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 A0A1W2PNR3 127 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 A0A1W2PQM1 296 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 SNAI2O43623 268 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 GCSHP23434 173 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 KIR2DS2P43631 304 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 RPL30P62888 115 aaKnown RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 RIGQ13278 110 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 C20orf204Q6ZNR8 217 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 CEND1Q8N111 149 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 SYT8Q8NBV8 401 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 SLC37A2Q8TED4 501 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 CDX2Q99626 313 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 NABP2Q9BQ15 211 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 NAA38Q9BRA0 125 aaKnown RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 SSBP3Q9BWW4 388 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 SLC25A2Q9BXI2 301 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 OR2H1Q9GZK4 316 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 TP73-AS1Q9UF72 201 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 MRPS17Q9Y2R5 130 aaKnown RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 MPC1Q9Y5U8 109 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 SH2D7A6NKC9 451 aaPredicted RBP6.86□□□□□ -1.31
SMCO1-202ENST00000452776 B5MCH6 92 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 MGST3O14880 152 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 Q6Q795 121 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMCO1-202ENST00000452776 MIR17HGQ75NE6 70 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 GATD1Q8NB37 220 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 SSMEM1Q8WWF3 244 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 PPDPFLQ8WWR9 84 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 PRSS22Q9GZN4 317 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 RAB1BQ9H0U4 201 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 YAE1D1Q9NRH1 226 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 OCIAD1Q9NX40 245 aa6.86□□□□□ -1.31
SMCO1-202ENST00000452776 FBLL1A6NHQ2 334 aaKnown RBP6.85□□□□□ -1.31
SMCO1-202ENST00000452776 GGTLC3B5MD39 225 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 PEX7O00628 323 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 HSPB6O14558 160 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 TNFRSF13BO14836 293 aaPredicted RBP6.85□□□□□ -1.31
SMCO1-202ENST00000452776 P01737 135 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 APOHP02749 345 aaPredicted RBP6.85□□□□□ -1.31
SMCO1-202ENST00000452776 DUTP33316 252 aaKnown RBP6.85□□□□□ -1.31
SMCO1-202ENST00000452776 PLA2G5P39877 138 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 FOXA3P55318 350 aaPredicted RBP6.85□□□□□ -1.31
SMCO1-202ENST00000452776 GNG3P63215 75 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 ATP5G2Q06055 141 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF146Q15072 292 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 SH2D6Q7Z4S9 175 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 OR5AN1Q8NGI8 311 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 HINT2Q9BX68 163 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 CFHR5Q9BXR6 569 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 PRO0461Q9UI25 63 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 POLDIP2Q9Y2S7 368 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 KLF12Q9Y4X4 402 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 CENPVL3A0A0U1RRI6 287 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 TCRBV4S1A1TA0A5B7 111 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 OOEPA6NGQ2 149 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 RNF223E7ERA6 249 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF32P17041 273 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 SRD5A1P18405 259 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 MPV17P39210 176 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 ASIPP42127 132 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 TNFRSF4P43489 277 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF542PQ5EBM4 170 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 Q6AWC8 147 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 SLC25A48Q6ZT89 311 aaKnown RBP6.85□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF414Q96IQ9 312 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 SLC25A33Q9BSK2 321 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 MAP1LC3AQ9H492 121 aa6.85□□□□□ -1.31
SMCO1-202ENST00000452776 C17orf98A8MV24 154 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 SHISA8B8ZZ34 492 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 B9A039 149 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 LINC01619G3V211 115 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 CNIH1O95406 144 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 PF4V1P10720 104 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 PPP1CAP62136 330 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 RPS16P62249 146 aaKnown RBP6.84□□□□□ -1.31
SMCO1-202ENST00000452776 TTC32Q5I0X7 151 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 RPS19BP1Q86WX3 136 aaKnown RBP6.84□□□□□ -1.31
SMCO1-202ENST00000452776 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 OR1L4Q8NGR5 311 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 ARPC1AQ92747 370 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 FMC1Q96HJ9 113 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 B4GALT7Q9UBV7 327 aa6.84□□□□□ -1.31
SMCO1-202ENST00000452776 TNRC18O15417 2968 aaPredicted RBP6.84□□□□□ -1.32
SMCO1-202ENST00000452776 ARID1BQ8NFD5 2236 aaPredicted RBP6.83□□□□□ -1.32
SMCO1-202ENST00000452776 LOC102723996A0A087X1L8 192 aa6.83□□□□□ -1.32
SMCO1-202ENST00000452776 TMEM30CPA0ZSE6 113 aa6.83□□□□□ -1.32
SMCO1-202ENST00000452776 FABP5P3A8MUU1 101 aa6.83□□□□□ -1.32
SMCO1-202ENST00000452776 NPIPB6E9PJ23 425 aa6.83□□□□□ -1.32
SMCO1-202ENST00000452776 RHODO00212 210 aa6.83□□□□□ -1.32
SMCO1-202ENST00000452776 MT-ATP8P03928 68 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms