RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ZNF124Q15973 351 aa7.22□□□□□ -1.25
USP54-207ENST00000451492 MLANAQ16655 118 aa7.22□□□□□ -1.25
USP54-207ENST00000451492 WFDC3Q8IUB2 231 aa7.22□□□□□ -1.25
USP54-207ENST00000451492 FAM219AQ8IW50 185 aa7.22□□□□□ -1.25
USP54-207ENST00000451492 TOMM5Q8N4H5 51 aa7.22□□□□□ -1.25
USP54-207ENST00000451492 TXN2Q99757 166 aa7.22□□□□□ -1.25
USP54-207ENST00000451492 RHPN1-AS1Q9BWJ2 59 aa7.22□□□□□ -1.25
USP54-207ENST00000451492 FNDC4Q9H6D8 234 aaPredicted RBP7.22□□□□□ -1.25
USP54-207ENST00000451492 MRPL36Q9P0J6 103 aaKnown RBP7.22□□□□□ -1.25
USP54-207ENST00000451492 SMPXQ9UHP9 88 aa7.22□□□□□ -1.25
USP54-207ENST00000451492 PUS1Q9Y606 427 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP54-207ENST00000451492 DYNC2H1Q8NCM8 4307 aaKnown RBP7.21□□□□□ -1.26
USP54-207ENST00000451492 TRAV14DV4A0A0A6YYC5 116 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 OR4C46A6NHA9 309 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 K7EMT4 169 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 CORTO00230 105 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 APOHP02749 345 aaPredicted RBP7.21□□□□□ -1.26
USP54-207ENST00000451492 FAUP35544 74 aaKnown RBP7.21□□□□□ -1.26
USP54-207ENST00000451492 SPCS3P61009 180 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 RPL11P62913 178 aaKnown RBP7.21□□□□□ -1.26
USP54-207ENST00000451492 TMEM187Q14656 261 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 ODF3L2Q3SX64 289 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 TOMM20LQ6UXN7 152 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 ZNF600Q6ZNG1 722 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 APRG1Q8IVJ8 170 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 ST8SIA2Q92186 375 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 TRIM63Q969Q1 353 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 OR10C1Q96KK4 312 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 ATP6V0BQ99437 205 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 GINS3Q9BRX5 216 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.21□□□□□ -1.26
USP54-207ENST00000451492 V9GYH0 126 aa7.21□□□□□ -1.26
USP54-207ENST00000451492 A0A1B0GU03 582 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 TMEM50AO95807 157 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 SULT1A3P0DMM9 295 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 SULT1A4P0DMN0 295 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 ANXA3P12429 323 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 FCGR2BP31994 310 aaPredicted RBP7.2□□□□□ -1.26
USP54-207ENST00000451492 HTR2BP41595 481 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 KLF9Q13886 244 aaPredicted RBP7.2□□□□□ -1.26
USP54-207ENST00000451492 ZNF79Q15937 498 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 DEFB135Q30KP9 77 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 TIGITQ495A1 244 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 TCF24Q7RTU0 167 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 LYZL2Q7Z4W2 148 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 SLC24A4Q8NFF2 622 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 SOSTQ9BQB4 213 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 RBM38Q9H0Z9 239 aaKnown RBP7.2□□□□□ -1.26
USP54-207ENST00000451492 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 KCNIP3Q9Y2W7 256 aa7.2□□□□□ -1.26
USP54-207ENST00000451492 RYR2Q92736 4967 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 RPS10-NUDT3A0A1W2PQS6 291 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 INS-IGF2F8WCM5 200 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 CLN5O75503 358 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 SCGB2A1O75556 95 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 IFNA10P01566 189 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 VAMP1P23763 118 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 NPY1RP25929 384 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 INPP1P49441 399 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 RND2P52198 227 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 AP3S2P59780 193 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 SUPT4H1P63272 117 aaKnown RBP7.19□□□□□ -1.26
USP54-207ENST00000451492 OR1S1Q8NH92 325 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 GALNT14Q96FL9 552 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 SCGB3A2Q96PL1 93 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 RBKSQ9H477 322 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 RABAC1Q9UI14 185 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 TMEM56-RWDD3S4R434 201 aa7.19□□□□□ -1.26
USP54-207ENST00000451492 LINC00854A0A1B0GVQ3 168 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 DNASE2O00115 360 aaPredicted RBP7.18□□□□□ -1.26
USP54-207ENST00000451492 DFFBO76075 338 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 IAPPP10997 89 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 BMI1P35226 326 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 APOC4P55056 127 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 PMS2P11Q13670 270 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 SMCO1Q147U7 214 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 BSXQ3C1V8 233 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 C2orf83Q53S99 150 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 SPANXN2Q5MJ10 180 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 CCDC190Q86UF4 302 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 LGI3Q8N145 548 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 LILRB2Q8N423 598 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 STXBP6Q8NFX7 210 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 OR4X1Q8NH49 305 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 OR52E5Q8NH55 327 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 DTD1Q8TEA8 209 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 IL22RA2Q969J5 263 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 ACY3Q96HD9 319 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 OVOL2Q9BRP0 275 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 MAP6D1Q9H9H5 199 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 PAIP2BQ9ULR5 123 aaKnown RBP7.18□□□□□ -1.26
USP54-207ENST00000451492 HYDINQ4G0P3 5121 aa7.18□□□□□ -1.26
USP54-207ENST00000451492 A0A0B4J2A0 478 aa7.17□□□□□ -1.26
USP54-207ENST00000451492 NPPCP23582 126 aa7.17□□□□□ -1.26
USP54-207ENST00000451492 OR10J1P30954 320 aa7.17□□□□□ -1.26
USP54-207ENST00000451492 CCR6P51684 374 aa7.17□□□□□ -1.26
USP54-207ENST00000451492 PAFAH1B2P68402 229 aa7.17□□□□□ -1.26
USP54-207ENST00000451492 TNFRSF9Q07011 255 aa7.17□□□□□ -1.26
USP54-207ENST00000451492 AARDQ4LEZ3 155 aa7.17□□□□□ -1.26
USP54-207ENST00000451492 NMSQ5H8A3 153 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms